RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 LYPLAL1Q5VWZ2 237 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CYB5D1Q6P9G0 228 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 TMEM207Q6UWW9 146 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 MAVSQ7Z434 540 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 LDB1Q86U70 411 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 TMEM25Q86YD3 366 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CAMK1DQ8IU85 385 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 C7orf61Q8IZ16 206 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ADGRG2Q8IZP9 1017 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 LSMEM2Q8N112 164 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 PCDH20Q8N6Y1 951 aaKnown RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 OR2AP1Q8NGE2 309 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 MAGEC3Q8TD91 643 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ANKRD49Q8WVL7 239 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 VOPP1Q96AW1 172 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF707Q96C28 371 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ECHDC3Q96DC8 303 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 TCEAL4Q96EI5 215 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 FAR2Q96K12 515 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 RILPQ96NA2 401 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 LBHD1Q9BQE6 289 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CCDC106Q9BWC9 280 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 NMUR2Q9GZQ4 415 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 TAS2R13Q9NYV9 303 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 FBXO10Q9UK96 956 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CCL26Q9Y258 94 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CRYL1Q9Y2S2 319 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 MED16Q9Y2X0 877 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 PKP3Q9Y446 797 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF711Q9Y462 761 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 WASH3PC4AMC7 463 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 SCAMP3O14828 347 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 BUD23O43709 281 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 ESR1P03372 595 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 TPBGLP0DKB5 382 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 KITP10721 976 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 ESRRAP11474 423 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 PABPC1P11940 636 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 PKMP14618 531 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 EPCAMP16422 314 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF37AP17032 561 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 RPS3P23396 243 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 SERPINA4P29622 427 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 PRDX6P30041 224 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 HLA-FP30511 346 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 MC4RP32245 332 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 PPARGP37231 505 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 GLRBP48167 497 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 MNAT1P51948 309 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 EPHB1P54762 984 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 ECT2LQ008S8 904 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 PEX6Q13608 980 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 SLC5A9Q2M3M2 681 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 GPR33Q49SQ1 333 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 SETMARQ53H47 684 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 CARD16Q5EG05 197 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 TPGS1Q6ZTW0 290 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 RGL4Q8IZJ4 473 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 NKAPQ8N5F7 415 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 CELF5Q8N6W0 485 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF781Q8N8C0 355 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 TXNDC5Q8NBS9 432 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 RIN3Q8TB24 985 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 DTX3LQ8TDB6 740 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 HCAR2Q8TDS4 363 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 KCNJ9Q92806 393 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 KIAA1191Q96A73 305 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 EID2BQ96D98 161 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 L3HYPDHQ96EM0 354 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 SCRN2Q96FV2 425 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 PDLIM5Q96HC4 596 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 BIRC8Q96P09 236 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 ASB2Q96Q27 587 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 MCCC1Q96RQ3 725 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 TTC1Q99614 292 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 EBF4Q9BQW3 602 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 BTBD10Q9BSF8 475 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 CCDC28BQ9BUN5 200 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 HTATIP2Q9BUP3 242 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 TBC1D10AQ9BXI6 508 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 GPR63Q9BZJ6 419 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 DERL2Q9GZP9 239 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 MCOLN1Q9GZU1 580 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 LMAN2LQ9H0V9 348 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 P2RY12Q9H244 342 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 C1orf21Q9H246 121 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 CCDC68Q9H2F9 335 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 MMADHCQ9H3L0 296 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 COG4Q9H9E3 785 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 ZFYVE1Q9HBF4 777 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 EML4Q9HC35 981 aaKnown RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 SPHK2Q9NRA0 654 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 MRGBPQ9NV56 204 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 ARL8BQ9NVJ2 186 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 POLR3BQ9NW08 1133 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 MARCOQ9UEW3 520 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 EVLQ9UI08 416 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-235ENST00000556082 TAGLN3Q9UI15 199 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 APPL1Q9UKG1 709 aa8.24□□□□□ -1.09
ATXN3-235ENST00000556082 TMCO1Q9UM00 188 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms