RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 TRAPPC12Q8WVT3 735 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 KCTD13Q8WZ19 329 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 ISG20Q96AZ6 181 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 RPL10LQ96L21 214 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 TEPSINQ96N21 525 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 TRIM8Q9BZR9 551 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 SLIRPQ9GZT3 109 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 MMP27Q9H306 513 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 TRIT1Q9H3H1 467 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 TUBB1Q9H4B7 451 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 GLOD4Q9HC38 313 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 WDR6Q9NNW5 1121 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 PCDH12Q9NPG4 1184 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 POLE4Q9NR33 117 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.72□□□□□ -1.17
CHD8-209ENST00000555935 ZIM2Q9NZV7 527 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 GIMAP2Q9UG22 337 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 INTS6Q9UL03 887 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 V9GYQ6 96 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 FNDC1Q4ZHG4 1894 aaPredicted RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 LOC100130705A0A1B0GUX0 176 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 FAM234BA2RU67 622 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 A8MU76 341 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 PTGES3LE9PB15 166 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 H0Y626 953 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 H3BMM5 538 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 WNT10BO00744 389 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 PPEF2O14830 753 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 SLC16A6O15403 523 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 SLC22A3O75751 556 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 TRIM16O95361 564 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 C1RP00736 705 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 HOXB8P17481 243 aaPredicted RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 PTPRAP18433 802 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 AGXTP21549 392 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 CCNCP24863 283 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 KRT6CP48668 564 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 ST13P50502 369 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 POLR2JP52435 117 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 CDH13P55290 713 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 OR4D2P58180 307 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 VBP1P61758 197 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 TUBA1BP68363 451 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 FADDQ13158 208 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 KIAA0319Q5VV43 1072 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 SYPL2Q5VXT5 272 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 CATSPERGQ6ZRH7 1159 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 TUBA1AQ71U36 451 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 PAGE2Q7Z2X7 111 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 RBM23Q86U06 439 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 PLD3Q8IV08 490 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 PTGR2Q8N8N7 351 aaPredicted RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 SETD9Q8NE22 299 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 SPATA22Q8NHS9 363 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 ATL1Q8WXF7 558 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 NDRG1Q92597 394 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 HTRA1Q92743 480 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 PGAP3Q96FM1 320 aaPredicted RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 REXO5Q96IC2 774 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 TNIP3Q96KP6 325 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 TMEM74Q96NL1 305 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 CCDC115Q96NT0 180 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 CLSTN3Q9BQT9 956 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 NUSAP1Q9BXS6 441 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 FAM49AQ9H0Q0 323 aaPredicted RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 HOXC10Q9NYD6 342 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 NPAP1Q9NZP6 1156 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 OSGIN1Q9UJX0 560 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 EIF3LQ9Y262 564 aaKnown RBP7.72□□□□□ -1.17
CHD8-209ENST00000555935 TPRKBQ9Y3C4 175 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 TRIP11Q15643 1979 aa7.72□□□□□ -1.17
CHD8-209ENST00000555935 C19orf81C9J6K1 198 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 LRIG2O94898 1065 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 C22orf31O95567 290 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 DLGAP3O95886 979 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 KRT8P05787 483 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 LINC00032P0C843 101 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 HOXB6P17509 224 aaKnown RBP7.71□□□□□ -1.17
CHD8-209ENST00000555935 JUNDP17535 347 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 GGT1P19440 569 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 PAX3P23760 479 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 PIGAP37287 484 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 NR4A2P43354 598 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 ZFP36L2P47974 494 aaKnown RBP7.71□□□□□ -1.17
CHD8-209ENST00000555935 DIO3P55073 304 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 CXCR4P61073 352 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 VAC14Q08AM6 782 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 LCP2Q13094 533 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 SLC13A2Q13183 592 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 LY6KQ17RY6 165 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 DCAF4L1Q3SXM0 396 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 MFSD4BQ5TF39 518 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 TMEM236Q5W0B7 351 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 TAS2R42Q7RTR8 314 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 HOMEZQ8IX15 550 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 CLIP4Q8N3C7 705 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 DTWD1Q8N5C7 304 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 POC5Q8NA72 575 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 OR7G1Q8NGA0 311 aa7.71□□□□□ -1.17
CHD8-209ENST00000555935 MCOLN3Q8TDD5 553 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms