RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CASP2P42575 452 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 TTPAP49638 278 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CDK9P50750 372 aaKnown RBP6.95□□□□□ -1.3
TDP1-213ENST00000555880 FOXA1P55317 472 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 RCAN2Q14206 197 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 SEMA3AQ14563 771 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 IHHQ14623 411 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 PTPRCAPQ14761 206 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CYP51A1Q16850 503 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 NHSL2Q5HYW2 709 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 TMTC4Q5T4D3 741 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 IL31Q6EBC2 164 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 ALG1LQ6GMV1 187 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 OGFOD2Q6N063 350 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 BRICD5Q6PL45 260 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 PAQR3Q6TCH7 311 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 GPR141Q7Z602 305 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 ERI1Q8IV48 349 aaKnown RBP6.95□□□□□ -1.3
TDP1-213ENST00000555880 LGI2Q8N0V4 545 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 ZNF786Q8N393 782 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 OR56A4Q8NGH8 313 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 FAM81AQ8TBF8 368 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 GPR152Q8TDT2 470 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 DIS3LQ8TF46 1054 aaKnown RBP6.95□□□□□ -1.3
TDP1-213ENST00000555880 TFAP2CQ92754 450 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CDKN2AIPNLQ96HQ2 116 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 NSUN5Q96P11 429 aaKnown RBP6.95□□□□□ -1.3
TDP1-213ENST00000555880 KCNA7Q96RP8 456 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CDK5RAP1Q96SZ6 601 aaKnown RBP6.95□□□□□ -1.3
TDP1-213ENST00000555880 ADI1Q9BV57 179 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 MAGEH1Q9H213 219 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 ALG2Q9H553 416 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 RETREG1Q9H6L5 497 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CD320Q9NPF0 282 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 IL37Q9NZH6 218 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 UBA2Q9UBT2 640 aaPredicted RBP6.95□□□□□ -1.3
TDP1-213ENST00000555880 GIMAP2Q9UG22 337 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 EGFL7Q9UHF1 273 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 TRMT6Q9UJA5 497 aaKnown RBP6.95□□□□□ -1.3
TDP1-213ENST00000555880 LEF1Q9UJU2 399 aaPredicted RBP6.95□□□□□ -1.3
TDP1-213ENST00000555880 CEPT1Q9Y6K0 416 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 CROCCQ5TZA2 2017 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 PCNTO95613 3336 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 FRMPD3Q5JV73 1810 aa6.95□□□□□ -1.3
TDP1-213ENST00000555880 FAM92AA1XBS5 289 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 NPEPPSL1A6NEC2 478 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 MOXD2PA6NHM9 499 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 LRRC14BA6NHZ5 514 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 H3BSA7 217 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 FXYD1O00168 92 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PPP6CO00743 305 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SEPT4O43236 478 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TPST1O60507 370 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SNAP91O60641 907 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 EEDO75530 441 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 SLC22A3O75751 556 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 RASAL1O95294 804 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ESRRBO95718 433 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 NPPAP01160 153 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 IGLV3-27P01718 113 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 RPS17P08708 135 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 SPATA31D3P0C874 917 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 UMPSP11172 480 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 NELFEP18615 380 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 CES1P23141 567 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 MYF6P23409 242 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SLC5A2P31639 672 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ALDH3B2P48448 385 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 MRPL19P49406 292 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 FLT3LGP49771 235 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ZNF140P52738 457 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 OXCT1P55809 520 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ARPP19P56211 112 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 IL2P60568 153 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TIAL1Q01085 375 aaKnown RBP eCLIP6.94□□□□□ -1.3
TDP1-213ENST00000555880 GNA12Q03113 381 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 DSC1Q08554 894 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TAF10Q12962 218 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 NOGQ13253 232 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 DCTN2Q13561 401 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 TAF1AQ15573 450 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 TSNQ15631 228 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 AARS2Q5JTZ9 985 aaKnown RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 SPATA31D4Q6ZUB0 917 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 GPRIN3Q6ZVF9 776 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SLC24A5Q71RS6 500 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 IFNEQ86WN2 208 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 ZNF280BQ86YH2 543 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 PHYKPLQ8IUZ5 450 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TBC1D21Q8IYX1 336 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 FIBCD1Q8N539 461 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 TRPV3Q8NET8 790 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 OR4K2Q8NGD2 314 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SH3RF2Q8TEC5 729 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 OSCP1Q8WVF1 389 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 CYGBQ8WWM9 190 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 SEPT8Q92599 483 aa6.94□□□□□ -1.3
TDP1-213ENST00000555880 EZH1Q92800 747 aaPredicted RBP6.94□□□□□ -1.3
TDP1-213ENST00000555880 HLA-CQ95604 372 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms