RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 RAXQ9Y2V3 346 aa13.51□□□□□ -0.25
SNX6-203ENST00000555416 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
SNX6-203ENST00000555416 ACACAQ13085 2346 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 UNC13CQ8NB66 2214 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 GLYATL1P3A0A0U1RQE8 302 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 PRR19A6NJB7 356 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 STX7O15400 261 aaKnown RBP13.5□□□□□ -0.25
SNX6-203ENST00000555416 LDB2O43679 373 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 NUDT21O43809 227 aaKnown RBP13.5□□□□□ -0.25
SNX6-203ENST00000555416 CEP104O60308 925 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 IFNB1P01574 187 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 FGGP02679 453 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 MPOP05164 745 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 LPOP22079 712 aaPredicted RBP13.5□□□□□ -0.25
SNX6-203ENST00000555416 GRIA1P42261 906 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 KCNJ1P48048 391 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 CTSCP53634 463 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 OR1D5P58170 312 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 TMPRSS15P98073 1019 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 LRP8Q14114 963 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 C11orf96Q7Z7L8 435 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 ZNF761Q86XN6 746 aaPredicted RBP13.5□□□□□ -0.25
SNX6-203ENST00000555416 RASGEF1AQ8N9B8 481 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 BRSK1Q8TDC3 778 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 SLC37A2Q8TED4 501 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 UBE2Q2Q8WVN8 375 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 PDLIM2Q96JY6 352 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 DEPDC7Q96QD5 511 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 FOXP3Q9BZS1 431 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 NRSN2Q9GZP1 204 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 LRRN3Q9H3W5 708 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 RMI1Q9H9A7 625 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 ETNK1Q9HBU6 452 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 PRDM8Q9NQV8 689 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 SMARCAL1Q9NZC9 954 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNX6-203ENST00000555416 SCHIP1Q9P0W5 487 aaPredicted RBP13.5□□□□□ -0.25
SNX6-203ENST00000555416 DKK4Q9UBT3 224 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 ZNF148Q9UQR1 794 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 PKP3Q9Y446 797 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 ZNF106Q9H2Y7 1883 aaKnown RBP13.5□□□□□ -0.25
SNX6-203ENST00000555416 PKD1L2Q7Z442 2459 aa13.5□□□□□ -0.25
SNX6-203ENST00000555416 DSPP15924 2871 aaKnown RBP13.5□□□□□ -0.25
SNX6-203ENST00000555416 USP27XA6NNY8 438 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 D6RAR5 112 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 AGRPO00253 132 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 TLX3O43711 291 aaPredicted RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 BRINP1O60477 761 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 SNX2O60749 519 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 CDK14O94921 469 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 AP2A1O95782 977 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 ZNF7P17097 686 aaPredicted RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 STIP1P31948 543 aaKnown RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 RPL22P35268 128 aaKnown RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 TMEM115Q12893 351 aaPredicted RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 PEX6Q13608 980 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 SPIDRQ14159 915 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 CCNG2Q16589 344 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 P3H1Q32P28 736 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 GPRC6AQ5T6X5 926 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 SLC35F6Q8N357 371 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 SFRP1Q8N474 314 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 PRELID2Q8N945 189 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 OR52K1Q8NGK4 314 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 GDAP1Q8TB36 358 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 DTX3LQ8TDB6 740 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 PRR11Q96HE9 360 aaPredicted RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 MS4A14Q96JA4 679 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 DNAJC1Q96KC8 554 aaKnown RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 FRMD8P1Q9BZ68 369 aaPredicted RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 FAM96AQ9H5X1 160 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 LRRC40Q9H9A6 602 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 KLC4Q9NSK0 619 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 TRMT1Q9NXH9 659 aaKnown RBP13.49□□□□□ -0.25
SNX6-203ENST00000555416 AK5Q9Y6K8 562 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 CFAP47Q6ZTR5 3102 aa13.49□□□□□ -0.25
SNX6-203ENST00000555416 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 CCDC78A2IDD5 438 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 C2orf81A6NN90 581 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 NRDCO43847 1150 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 VEGFDO43915 354 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 TCEA3O75764 348 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 ZNF189O75820 626 aaPredicted RBP13.48□□□□□ -0.25
SNX6-203ENST00000555416 SRP72O76094 671 aaKnown RBP13.48□□□□□ -0.25
SNX6-203ENST00000555416 PRAMEF1O95521 474 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 PNLIPP16233 465 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 CD1CP29017 333 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 ALDH4A1P30038 563 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 CDKN1CP49918 316 aaPredicted RBP13.48□□□□□ -0.25
SNX6-203ENST00000555416 CFHR1Q03591 330 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 POU6F1Q14863 301 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 NR1D2Q14995 579 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 AMZ1Q400G9 498 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 NKAIN2Q5VXU1 208 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 ZDHHC20Q5W0Z9 365 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 IYDQ6PHW0 289 aa13.48□□□□□ -0.25
SNX6-203ENST00000555416 ZNF574Q6ZN55 896 aaPredicted RBP13.48□□□□□ -0.25
SNX6-203ENST00000555416 USP53Q70EK8 1073 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms