RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TCEA2Q15560 299 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 SEPT7Q16181 437 aaKnown RBP9.81□□□□□ -0.84
PSEN1-213ENST00000555386 WSCD2Q2TBF2 565 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 ZNF542PQ5EBM4 170 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 LGSNQ5TDP6 509 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CGB2Q6NT52 195 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CYB5D1Q6P9G0 228 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 GCNT7Q6ZNI0 430 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CAPN12Q6ZSI9 719 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 Q6ZSR6 202 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CYS1Q717R9 158 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 GLT6D1Q7Z4J2 308 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 C4orf33Q8N1A6 199 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 PELI3Q8N2H9 469 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 BANPQ8N9N5 519 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 DNAAF3Q8N9W5 541 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CCDC63Q8NA47 563 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 PLA2G15Q8NCC3 412 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 OR13H1Q8NG92 308 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 OR52K1Q8NGK4 314 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 C1orf216Q8TAB5 229 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CEP76Q8TAP6 659 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 SCAMP4Q969E2 229 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 KLHDC7BQ96G42 594 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 ZFYVE1Q9HBF4 777 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 XAB2Q9HCS7 855 aaKnown RBP9.81□□□□□ -0.84
PSEN1-213ENST00000555386 ABCF3Q9NUQ8 709 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 SLC6A14Q9UN76 642 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CHMP2BQ9UQN3 213 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 DMTF1Q9Y222 760 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 ANKRD6Q9Y2G4 727 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 OR1A2Q9Y585 309 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 SNX11Q9Y5W9 270 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 USH1CQ9Y6N9 552 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 SCN8AQ9UQD0 1980 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 CEP250Q9BV73 2442 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 A0A1W2PPM1 405 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 LNP1A1A4G5 178 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 PRR5-ARHGAP8B1AHC4 643 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 K7ESM1 405 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 SCAMP1O15126 338 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 MGRN1O60291 552 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 DCTN3O75935 186 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 UBOX5O94941 541 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 AP2A1O95782 977 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 MT-ND3P03897 115 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 FGF1P05230 155 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 INHBAP08476 426 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 ZNF806P0C7X5 589 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 THEGLP0DJG4 465 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 ENGP17813 658 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 GM2AP17900 193 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 HLA-DPA1P20036 260 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 ADRA1AP35348 466 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 GRIA1P42261 906 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 DPP6P42658 865 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 SARNPP82979 210 aaKnown RBP9.8□□□□□ -0.84
PSEN1-213ENST00000555386 TMPRSS15P98073 1019 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 GRIK2Q13002 908 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 RIPK1Q13546 671 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 INPP5AQ14642 412 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 POU6F1Q14863 301 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 SETDB1Q15047 1291 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 ZKSCAN8Q15776 578 aaPredicted RBP9.8□□□□□ -0.84
PSEN1-213ENST00000555386 SLC14A2Q15849 920 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 CSRP2Q16527 193 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 KIF19Q2TAC6 998 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 UAP1L1Q3KQV9 507 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 PLA2G2CQ5R387 149 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 RAET1GQ6H3X3 334 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 PRR23CQ6ZRP0 262 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 RABEPKQ7Z6M1 372 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 SLC26A11Q86WA9 606 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 TP53I13Q8NBR0 393 aaPredicted RBP9.8□□□□□ -0.84
PSEN1-213ENST00000555386 PTCD2Q8WV60 388 aaKnown RBP9.8□□□□□ -0.84
PSEN1-213ENST00000555386 AP2M1Q96CW1 435 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 MTBPQ96DY7 904 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 APOPT1Q96IL0 206 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 BMFQ96LC9 184 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 COQ10AQ96MF6 247 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 PPP1R2P1Q96PQ5 205 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 KLF6Q99612 283 aaPredicted RBP9.8□□□□□ -0.84
PSEN1-213ENST00000555386 PAIP2Q9BPZ3 127 aaKnown RBP9.8□□□□□ -0.84
PSEN1-213ENST00000555386 ABCG8Q9H221 673 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 LRRC40Q9H9A6 602 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 IL21RQ9HBE5 538 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 MOSPD1Q9UJG1 213 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 PPIL1Q9Y3C6 166 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 KCTD3Q9Y597 815 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 ARL5AQ9Y689 179 aa9.8□□□□□ -0.84
PSEN1-213ENST00000555386 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-213ENST00000555386 A0A1W2PR77 199 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 TLR4O00206 839 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CCL22O00626 93 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 ARHGAP33O14559 1287 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 CHUKO15111 745 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 INPP4BO15327 924 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 PSMD3O43242 534 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 KRT37O76014 449 aa9.79□□□□□ -0.84
PSEN1-213ENST00000555386 EPOP01588 193 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms