RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 GRK3P35626 688 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 POLR2IP36954 125 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 DAG1Q14118 895 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 MFSD14CQ5VZR4 134 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 CXCL17Q6UXB2 119 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 RANBP10Q6VN20 620 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 C8orf59Q8N0T1 100 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 SPARTQ8N0X7 666 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 OR9I1Q8NGQ6 314 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 OR10T2Q8NGX3 314 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 TRIB2Q92519 343 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 FEM1AQ9BSK4 669 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 FSD1LQ9BXM9 530 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC25A51Q9H1U9 297 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 ALG2Q9H553 416 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 SP140LQ9H930 580 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 AGO3Q9H9G7 860 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 RRAGCQ9HB90 399 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 ARNT2Q9HBZ2 717 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 NECTIN3Q9NQS3 549 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 TREX1Q9NSU2 369 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 THG1LQ9NWX6 298 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 KLHL3Q9UH77 587 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 SUN2Q9UH99 717 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 IFT52Q9Y366 437 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 PCDHGB1Q9Y5G3 927 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 ISPDA4D126 451 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 FAM47E-STBD1D6RA91 191 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 E9PAM4 449 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 TNFRSF10BO14763 440 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 SYNCRIPO60506 623 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 BCAS1O75363 584 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 CLIC3O95833 236 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 POMCP01189 267 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 THRBP10828 461 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 CDH1P12830 882 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 GRIK1P39086 918 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 ARSFP54793 590 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 POU6F1Q14863 301 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 UGT3A2Q3SY77 523 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 ESRP1Q6NXG1 681 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 BLOC1S3Q6QNY0 202 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 CRTC3Q6UUV7 619 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 CYHR1Q6ZMK1 362 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 PLEKHG7Q6ZR37 379 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 ARHGAP36Q6ZRI8 547 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 LRRTM3Q86VH5 581 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 MFSD6LQ8IWD5 586 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 AADATQ8N5Z0 425 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 FAM110BQ8TC76 370 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 CSF3RQ99062 836 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 KCTD14Q9BQ13 255 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC39A3Q9BRY0 314 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 NMRK2Q9NPI5 230 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 EGFL7Q9UHF1 273 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 FIS1Q9Y3D6 152 aa10.62□□□□□ -0.71
MTHFD1-210ENST00000555252 PATJQ8NI35 1801 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 A0A1W2PP18 115 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 INPP4BO15327 924 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 TPST1O60507 370 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 GABARAPO95166 117 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 PAPSS2O95340 614 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MT-CYBP00156 380 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 HLA-DQB2P05538 268 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 HOXB6P17509 224 aaKnown RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 LBPP18428 481 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 CAPN3P20807 821 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 CD52P31358 61 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 THPOP40225 353 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC1A2P43004 574 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 GSK3BP49841 420 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 RENBPP51606 427 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MLLT10P55197 1068 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MLLT6P55198 1093 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 HUNKP57058 714 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 CSHL1Q14406 222 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 KCNJ8Q15842 424 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 DGUOKQ16854 277 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF678Q5SXM1 525 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MSANTD2Q6P1R3 559 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC16A12Q6ZSM3 486 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SPATA19Q7Z5L4 167 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 RASAL3Q86YV0 1011 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 UMODL1-AS1Q8N2C9 162 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 TRPV1Q8NER1 839 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 BPIFB6Q8NFQ5 453 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SCAMP5Q8TAC9 235 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MUS81Q96NY9 551 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC30A3Q99726 388 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 FUNDC2Q9BWH2 189 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 AKTIPQ9H8T0 292 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MTRRQ9UBK8 725 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MAGEL2Q9UJ55 1249 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 FBXO5Q9UKT4 447 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 TLR6Q9Y2C9 796 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 PCDHGA11Q9Y5H2 935 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 SNX5Q9Y5X3 404 aa10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 MSI1O43347 362 aaKnown RBP10.61□□□□□ -0.71
MTHFD1-210ENST00000555252 EEDO75530 441 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms