RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 PMF1-BGLAPU3KQ54 211 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 A0A1W2PQH9 124 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 LGR5O75473 907 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 UGT2B17O75795 530 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 BUD31P41223 144 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CBX3Q13185 183 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 MNTQ99583 582 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ABCG8Q9H221 673 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 PDZD7Q9H5P4 517 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 FBXO10Q9UK96 956 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 TELO2Q9Y4R8 837 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 PCDHGA3Q9Y5H0 932 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 MAFBQ9Y5Q3 323 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 MRC1P22897 1456 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 NFAT5O94916 1531 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 E9PAM4 449 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 C1QTNF3-AMACRE9PGA6 284 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 TRIM3O75382 744 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 SCGNO76038 276 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 PGK1P00558 417 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 RLN1P04808 185 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 SIM2Q14190 667 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 NPY5RQ15761 445 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 USP41Q3LFD5 358 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 GALNT5Q7Z7M9 940 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CACUL1Q86Y37 369 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 APOLD1Q96LR9 279 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF221Q9UK13 617 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CCDC189A1A4V9 331 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ARHGEF33A8MVX0 844 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 MATN3O15232 486 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 MSI1O43347 362 aaKnown RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CYP3A5P20815 502 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ACTR3P61158 418 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ACSBG2Q5FVE4 666 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 IL23RQ5VWK5 629 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 MAP1SQ66K74 1059 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 GPR142Q7Z601 462 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 COLGALT2Q8IYK4 626 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CYP4X1Q8N118 509 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 TFAP2BQ92481 460 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 PPIEQ9UNP9 301 aaKnown RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF510Q9Y2H8 683 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 TIMM22Q9Y584 194 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 NOS1APO75052 506 aaPredicted RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 GDF10P55107 478 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CACNG1Q06432 222 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 IKBKEQ14164 716 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CCDC36Q8IYA8 594 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ZBTB2Q8N680 514 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 TRPV3Q8NET8 790 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 CLHC1Q8NHS4 586 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 GPR21Q99679 349 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 AARSD1Q9BTE6 412 aaKnown RBP13.86□□□□□ -0.19
VTI1B-204ENST00000554659 ASAH2Q9NR71 780 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 IGSF9Q9P2J2 1179 aa13.86□□□□□ -0.19
VTI1B-204ENST00000554659 STK16O75716 305 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 SLC25A14O95258 325 aaPredicted RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 CD52P31358 61 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 BRCC3P46736 316 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 HSF2Q03933 536 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 HKDC1Q2TB90 917 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 TCEAL5Q5H9L2 206 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 SATL1Q86VE3 508 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 PIK3C3Q8NEB9 887 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 SPPL2BQ8TCT7 592 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 C1GALT1C1Q96EU7 318 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 NUSAP1Q9BXS6 441 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 TRIT1Q9H3H1 467 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 SGK2Q9HBY8 427 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 ABCB9Q9NP78 766 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 PFDN2Q9UHV9 154 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 WDR4P57081 412 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 MYBPC1Q00872 1141 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 CAPN13Q6MZZ7 669 aaPredicted RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 AGMOQ6ZNB7 445 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 P2RY8Q86VZ1 359 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 CSGALNACT1Q8TDX6 532 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 APOBEC3GQ9HC16 384 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 NEK6Q9HC98 313 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 ACSS2Q9NR19 701 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 RASSF1Q9NS23 344 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 DGKBQ9Y6T7 804 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 GLYATL1P3A0A0U1RQE8 302 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 GSAPA4D1B5 854 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 CLDN9O95484 217 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 ZNF12P17014 697 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 TM4SF1P30408 202 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 ICAM3P32942 547 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 MAP2K5Q13163 448 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 HSDL1Q3SXM5 330 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 LDLRAP1Q5SW96 308 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 NODALQ96S42 347 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 HNRNPABQ99729 332 aaKnown RBP13.85□□□□□ -0.19
VTI1B-204ENST00000554659 DSN1Q9H410 356 aa13.85□□□□□ -0.19
VTI1B-204ENST00000554659 IPPKQ9H8X2 491 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms