RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 JPH3Q8WXH2 748 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 COX14Q96I36 57 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 OR2M4Q96R27 311 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 ANKZF1Q9H8Y5 726 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 KCTD5Q9NXV2 234 aa10.5□□□□□ -0.73
SHMT2-215ENST00000554656 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 OAS3Q9Y6K5 1087 aaKnown RBP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 V9GYY5 206 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-215ENST00000554656 MAST4O15021 2626 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 A0A0J9YYE9 177 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 CCDC151A5D8V7 595 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 HGSO14964 777 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 INPP4BO15327 924 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 PHF2O75151 1096 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 ERLIN1O75477 346 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 TRBC1P01850 177 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 ITGB2P05107 769 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 THRAP10827 490 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 H2AFXP16104 143 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 MPSTP25325 297 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 TNFRSF8P28908 595 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 SERPINB6P35237 376 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 SSR1P43307 286 aaKnown RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 GPR3P46089 330 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 FNTAP49354 379 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 NIPAL4Q0D2K0 466 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 SQSTM1Q13501 440 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 NAA30Q147X3 362 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 CLCA4Q14CN2 919 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 PAFAH1B3Q15102 231 aaKnown RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 PDK2Q15119 407 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 TAZQ16635 292 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 TBR1Q16650 682 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 MARK2Q7KZI7 788 aaKnown RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 ZNF765Q7L2R6 523 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 BBS5Q8N3I7 341 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 EIF1ADQ8N9N8 165 aaKnown RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 SLC37A2Q8TED4 501 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 AP2M1Q96CW1 435 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 RIOK2Q9BVS4 552 aaKnown RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 TDRD1Q9BXT4 1180 aaKnown RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 FRMD8P1Q9BZ68 369 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 OSBPL8Q9BZF1 889 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 TRIM4Q9C037 500 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 B3GNT4Q9C0J1 378 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 CDH19Q9H159 772 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 STARD5Q9NSY2 213 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 SMARCAL1Q9NZC9 954 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 RCOR3Q9P2K3 495 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 CNOT6Q9ULM6 557 aaKnown RBP10.49□□□□□ -0.73
SHMT2-215ENST00000554656 CHKBQ9Y259 395 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 B3GALT1Q9Y5Z6 326 aa10.49□□□□□ -0.73
SHMT2-215ENST00000554656 TRBV23OR9-2A0A075B6M9 112 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 FAM187AA6NFU0 413 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 FADS2P1A8MWK0 482 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 DNAJC6O75061 913 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 CLDN7O95471 211 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 KRT1P04264 644 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 HLA-DQB2P05538 268 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 MMP2P08253 660 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 CD82P27701 267 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 GJC1P36383 396 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 FASLGP48023 281 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 GBE1Q04446 702 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 SLC10A2Q12908 348 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 KLF1Q13351 362 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 KRT81Q14533 505 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 SIX1Q15475 284 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 CLPPQ16740 277 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 TFDP3Q5H9I0 405 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 DRICH1Q6PGQ1 229 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 SPOCD1Q6ZMY3 1216 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 PRICKLE2Q7Z3G6 844 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 MAP7D3Q8IWC1 876 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 SFRP1Q8N474 314 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 PQLC3Q8N755 202 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 BMPERQ8N8U9 685 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 OR4D9Q8NGE8 314 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 NSMCE1Q8WV22 266 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 SLCO2A1Q92959 643 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 ART4Q93070 314 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 NKD1Q969G9 470 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 TSGA13Q96PP4 275 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 TAAR9Q96RI9 348 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 KRT12Q99456 494 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 SLC12A9Q9BXP2 914 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 PARD6BQ9BYG5 372 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 POLR1EQ9GZS1 481 aaKnown RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 OCIAD1Q9NX40 245 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 SEPT10Q9P0V9 454 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 PCYOX1Q9UHG3 505 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 FEZ2Q9UHY8 353 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-215ENST00000554656 PRKAB1Q9Y478 270 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 PCDHGA3Q9Y5H0 932 aa10.48□□□□□ -0.73
SHMT2-215ENST00000554656 FLNCQ14315 2725 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 hCG_1818297A0A087WSY0 165 aa10.47□□□□□ -0.73
SHMT2-215ENST00000554656 A6NCN8 305 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms