RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 OLFM3Q96PB7 478 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 CLPBQ9H078 707 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 EPN3Q9H201 632 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 WDR26Q9H7D7 661 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 DTLQ9NZJ0 730 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 DKK4Q9UBT3 224 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 MOSPD1Q9UJG1 213 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 ACTL7BQ9Y614 415 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 AK5Q9Y6K8 562 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 ADAMTS20P59510 1910 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 CELSR3Q9NYQ7 3312 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 LY6G6EA0A0G2JKS1 128 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 C5orf60A6NFR6 353 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 NPIPB15A6NHN6 443 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-214ENST00000554604 PSMD11O00231 422 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 MT-CO3P00414 261 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 PDHA1P08559 390 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 PHBP35232 272 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 TRIM23P36406 574 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 ETV3P41162 512 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 KIAA1024LP59773 190 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 AP1B1Q10567 949 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 SLC10A2Q12908 348 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-214ENST00000554604 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 FAM182AQ5T1J6 154 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 TTC19Q6DKK2 380 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-214ENST00000554604 PNCKQ6P2M8 343 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 LVRNQ6Q4G3 990 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 EFL1Q7Z2Z2 1120 aaKnown RBP12.37□□□□□ -0.43
SHMT2-214ENST00000554604 EXOC3L1Q86VI1 746 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 GKN2Q86XP6 184 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 ZBED8Q8IZ13 594 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 CACTIN-AS1Q8N1I8 211 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 SDR16C5Q8N3Y7 309 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 DCBLD1Q8N8Z6 715 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 OR56A4Q8NGH8 313 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 BCAS4Q8TDM0 211 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 NAT6Q93015 286 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 FUBP1Q96AE4 644 aaKnown RBP12.37□□□□□ -0.43
SHMT2-214ENST00000554604 PDXPQ96GD0 296 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 DEPDC7Q96QD5 511 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 MCCC1Q96RQ3 725 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-214ENST00000554604 LGMNQ99538 433 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 BOCQ9BWV1 1114 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 PHPT1Q9NRX4 125 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-214ENST00000554604 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 GULP1Q9UBP9 304 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 CHKBQ9Y259 395 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 U3KQA8 63 aa12.37□□□□□ -0.43
SHMT2-214ENST00000554604 NBEAQ8NFP9 2946 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 EXOC1LA0A1B0GW35 172 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 TCRBV7S3A2A0A539 114 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 EME2A4GXA9 379 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-214ENST00000554604 TMEM202A6NGA9 273 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 KCNK1O00180 336 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 TNFRSF10CO14798 259 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-214ENST00000554604 JCHAINP01591 159 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 HLA-DQB2P05538 268 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 CELA2BP08218 269 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-214ENST00000554604 HOXC4P09017 264 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-214ENST00000554604 GM2AP17900 193 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 LHCGRP22888 699 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 FASTKD3Q14CZ7 662 aaKnown RBP12.36□□□□□ -0.43
SHMT2-214ENST00000554604 PDK1Q15118 436 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 PTPRRQ15256 657 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 CCDC38Q502W7 563 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 ALG1LQ6GMV1 187 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 RAET1GQ6H3X3 334 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 Q6ZVL8 140 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 HSD11B1LQ7Z5J1 315 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 TSPAN33Q86UF1 283 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 SLC35F3Q8IY50 421 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 MCUQ8NE86 351 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 PYROXD1Q8WU10 500 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 TFB1MQ8WVM0 346 aaKnown RBP12.36□□□□□ -0.43
SHMT2-214ENST00000554604 PIH1D2Q8WWB5 315 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 OR1E3Q8WZA6 343 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 DTD2Q96FN9 168 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 SELENOSQ9BQE4 189 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 NRSN2Q9GZP1 204 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 VPS37BQ9H9H4 285 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 CYP4F12Q9HCS2 524 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 FGF22Q9HCT0 170 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 RAB6BQ9NRW1 208 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 SEPT10Q9P0V9 454 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 PADI4Q9UM07 663 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 GPR34Q9UPC5 381 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 RAXQ9Y2V3 346 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 PPIL1Q9Y3C6 166 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 DGKBQ9Y6T7 804 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 ITPR1Q14643 2758 aa12.36□□□□□ -0.43
SHMT2-214ENST00000554604 LAMA5O15230 3695 aa12.35□□□□□ -0.43
SHMT2-214ENST00000554604 A0A0J9YYE9 177 aa12.35□□□□□ -0.43
SHMT2-214ENST00000554604 GOLGA8MH3BSY2 632 aa12.35□□□□□ -0.43
SHMT2-214ENST00000554604 FZD6O60353 706 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms