RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SYTL2Q9HCH5 934 aa10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 SSU72Q9NP77 194 aaKnown RBP10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 SNX15Q9NRS6 342 aa10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 NKIRAS1Q9NYS0 192 aa10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 USP36Q9P275 1121 aaKnown RBP10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 CYP8B1Q9UNU6 501 aa10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 ANKRD6Q9Y2G4 727 aa10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 ACOT9Q9Y305 439 aa10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 F5P12259 2224 aa10.37□□□□□ -0.75
TMEM55B-205ENST00000554028 C5orf42Q9H799 3197 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 A0A087X1B8 175 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 A0A096LPK6 155 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 H3BQF6 201 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 GOLGA8RI6L899 631 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 TPP1O14773 563 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 INPP4BO15327 924 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 VEGFDO43915 354 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 RFPL1O75677 317 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 AP2A2O94973 939 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 PCCBP05166 539 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 COL6A2P12110 1019 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 ATP1B2P14415 290 aaPredicted RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 NR1D1P20393 614 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 RPS3P23396 243 aaKnown RBP eCLIP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 TEAD1P28347 426 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 MAT2AP31153 395 aaKnown RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 AKT2P31751 481 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 ACSL1P33121 698 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 ABCG1P45844 678 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 KPNA2P52292 529 aaKnown RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 MTAPQ13126 283 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 PDAP1Q13442 181 aaKnown RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 TMEM259Q4ZIN3 620 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 USP39Q53GS9 565 aaKnown RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 ZNF789Q5FWF6 425 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 ADAMTSL4Q6UY14 1074 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 TBC1D1Q86TI0 1168 aaPredicted RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 TRIM69Q86WT6 500 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 C4orf33Q8N1A6 199 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 DDHD1Q8NEL9 900 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 MZB1Q8WU39 189 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 TOE1Q96GM8 510 aaKnown RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 HIC2Q96JB3 615 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 SERAC1Q96JX3 654 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 SPACA7Q96KW9 195 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 NDNQ99608 321 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 MCMBPQ9BTE3 642 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 SLC13A1Q9BZW2 595 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 POPDC3Q9HBV1 291 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 GPAMQ9HCL2 828 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 TRIM39Q9HCM9 518 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 PHPT1Q9NRX4 125 aaPredicted RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 SPATA6Q9NWH7 488 aaPredicted RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 FAM53CQ9NYF3 392 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 EBF1Q9UH73 591 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 TRMT6Q9UJA5 497 aaKnown RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 GRID1Q9ULK0 1009 aa10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 ZFR2Q9UPR6 939 aaKnown RBP10.36□□□□□ -0.75
TMEM55B-205ENST00000554028 XIRP2A4UGR9 3374 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 HMX2A2RU54 273 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 FADS2P1A8MWK0 482 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 FPGTO14772 594 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 KPNA5O15131 536 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 AXIN1O15169 862 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 SLC31A1O15431 190 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 GPR39O43194 453 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 LAMTOR5O43504 91 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 OR1I1O60431 355 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 MAGEC1O60732 1142 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 GLRA3O75311 464 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 SPAG7O75391 227 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 FSBPO95073 299 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 ZWINTO95229 277 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 TRIM16O95361 564 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 ASMTLO95671 621 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 FTH1P02794 183 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 ALDOAP04075 364 aaKnown RBP10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 C2P06681 752 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 GSTA1P08263 222 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 GM2AP17900 193 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 AOC1P19801 751 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 SLC26A3P40879 764 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 CCR5P51681 352 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 TAS2R39P59534 338 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 SLC18A2Q05940 514 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 INSCQ1MX18 579 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 FAM83EQ2M2I3 478 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 TSNAXIP1Q2TAA8 658 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 WSCD2Q2TBF2 565 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 TTLL9Q3SXZ7 439 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 RBM20Q5T481 1227 aaKnown RBP10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 KIAA0895LQ68EN5 471 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 KLC3Q6P597 504 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 SLC36A4Q6YBV0 504 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 DENND6BQ8NEG7 585 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 KCNJ9Q92806 393 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 KLK6Q92876 244 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 ISL2Q96A47 359 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 APOPT1Q96IL0 206 aa10.35□□□□□ -0.75
TMEM55B-205ENST00000554028 ZNF514Q96K75 400 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms