RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 COX7A2P14406 83 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CD72P21854 359 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CPT2P23786 658 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PSMA3P25788 255 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TM4SF1P30408 202 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 DCTDP32321 178 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ICAM3P32942 547 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PNPLA4P41247 253 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SKIV2L2P42285 1042 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 GPD2P43304 727 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 RPS6KA3P51812 740 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ZNF41P51814 821 aaPredicted RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 EIF3BP55884 814 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 HSD17B7P56937 341 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 UFM1P61960 85 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 RPL7AP62424 266 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 RBP5P82980 135 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PMP22Q01453 160 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 FRG1Q14331 258 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 NFE2L1Q14494 772 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SLMAPQ14BN4 828 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 E2F5Q15329 346 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PTPN14Q15678 1187 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SLC1A5Q15758 541 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PKN2Q16513 984 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 ZSCAN23Q3MJ62 389 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SLC9B1Q4ZJI4 515 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 KRBOX4Q5JUW0 171 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CCDC158Q5M9N0 1113 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ERMARDQ5T6L9 678 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 GKAP1Q5VSY0 366 aaPredicted RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 RAB12Q6IQ22 244 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CAVIN1Q6NZI2 390 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 AADACL2Q6P093 401 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ALKBH5Q6P6C2 394 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 CNSTQ6PJW8 725 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 CPLX2Q6PUV4 134 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 ZNF497Q6ZNH5 498 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SATL1Q86VE3 508 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 DNAAF5Q86Y56 855 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 AADATQ8N5Z0 425 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SCAIQ8N9R8 606 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 POGLUT1Q8NBL1 392 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TNIP2Q8NFZ5 429 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 FAM76AQ8TAV0 307 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 GSDMBQ8TAX9 411 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ZCCHC10Q8TBK6 192 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 KRT35Q92764 455 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 SLC22A18Q96BI1 424 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 INTS12Q96CB8 462 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 RMDN1Q96DB5 314 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 RNFT2Q96EX2 444 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PGAP3Q96FM1 320 aaPredicted RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 WDFY2Q96P53 400 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TEFMQ96QE5 360 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 GCNAQ96QF7 691 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 LITAFQ99732 161 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 EGFL8Q99944 293 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PYGO2Q9BRQ0 406 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ANP32EQ9BTT0 268 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 DNAI2Q9GZS0 605 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 C2orf40Q9H1Z8 148 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 ERVMER34-1Q9H9K5 563 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PFDN4Q9NQP4 134 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 BEX4Q9NWD9 120 aaPredicted RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 PPP1R14DQ9NXH3 145 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 IL1RAPL1Q9NZN1 696 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 AKAP7Q9P0M2 348 aaPredicted RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 C5AR2Q9P296 337 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 KLQ9UEF7 1012 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 DHDHQ9UQ10 334 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PA2G4Q9UQ80 394 aaKnown RBP2.31□□□□□ -2.04
SRP54-204ENST00000553923 KNSTRNQ9Y448 316 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TRIM17Q9Y577 477 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TRPV2Q9Y5S1 764 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 PASKQ96RG2 1323 aa2.31□□□□□ -2.04
SRP54-204ENST00000553923 TRAV34A0A0B4J273 112 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 FRMD3A2A2Y4 597 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 PER2O15055 1255 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 STRNO43815 780 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 PSMD10O75832 226 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 STAM2O75886 525 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 KDM4BO94953 1096 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 CBX6O95503 412 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 ABCB1P08183 1280 aaPredicted RBP2.3□□□□□ -2.04
SRP54-204ENST00000553923 CHN1P15882 459 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 KCNA5P22460 613 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 YWHAQP27348 245 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 RPL3P39023 403 aaKnown RBP2.3□□□□□ -2.04
SRP54-204ENST00000553923 GP5P40197 560 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 PRKCIP41743 596 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 MATR3P43243 847 aaKnown RBP eCLIP2.3□□□□□ -2.045e-10■■■■□ 26.2
SRP54-204ENST00000553923 SLC15A1P46059 708 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 LIG4P49917 911 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 HSD17B4P51659 736 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 FUT6P51993 359 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 STAT2P52630 851 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 RAD23AP54725 363 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 MFAP4P55083 255 aa2.3□□□□□ -2.04
SRP54-204ENST00000553923 EVCP57679 992 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms