RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ALS2CLQ60I27 953 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 PPP1R21Q6ZMI0 780 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 TMC3Q7Z5M5 1100 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 GALNT13Q8IUC8 556 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 PHYKPLQ8IUZ5 450 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 RBFAQ8N0V3 343 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 CBARPQ8N350 705 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-209ENST00000553855 SLC25A45Q8N413 288 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 TRAM1L1Q8N609 369 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 DNAAF3Q8N9W5 541 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 OR6C4Q8NGE1 309 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 BAHD1Q8TBE0 780 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-209ENST00000553855 ATG4AQ8WYN0 398 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 NAT6Q93015 286 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 SCAMP4Q969E2 229 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 TADA1Q96BN2 335 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 OXNAD1Q96HP4 312 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-209ENST00000553855 PDLIM2Q96JY6 352 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 HERPUD2Q9BSE4 406 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 RSRP1Q9BUV0 290 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 RMI1Q9H9A7 625 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 UCKL1Q9NWZ5 548 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 PAK5Q9P286 719 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 GULP1Q9UBP9 304 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 GPR34Q9UPC5 381 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 DGKBQ9Y6T7 804 aa8.28□□□□□ -1.08
PSEN1-209ENST00000553855 TRPM6Q9BX84 2022 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 ADAMTS9Q9P2N4 1935 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 CPED1A4D0V7 1026 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 TMEM202A6NGA9 273 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 AP3B1O00203 1094 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 PGRMC1O00264 195 aaKnown RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 SLC25A14O95258 325 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 AGTP01019 485 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 IVLP07476 585 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 ATXN1LP0C7T5 689 aaKnown RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 GM2AP17900 193 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 LPOP22079 712 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 CXCR5P32302 372 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 HMGCLP35914 325 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 HADHAP40939 763 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 PPM1FP49593 454 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 GNG11P61952 73 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 ITGA9Q13797 1035 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 LRP8Q14114 963 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 IHHQ14623 411 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 PTPRRQ15256 657 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 TPRG1LQ5T0D9 272 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 KDM7AQ6ZMT4 941 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 MARK2Q7KZI7 788 aaKnown RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 SLC35F6Q8N357 371 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 PNPLA1Q8N8W4 532 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 FAM181AQ8N9Y4 354 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 FAM46DQ8NEK8 389 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 BRSK1Q8TDC3 778 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 ADAMTS14Q8WXS8 1223 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 OR1E3Q8WZA6 343 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 PDXPQ96GD0 296 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 APOLD1Q96LR9 279 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 PLEKHG4BQ96PX9 1271 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 SMIM14Q96QK8 99 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 OR2M4Q96R27 311 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 APOL2Q9BQE5 337 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 LRRC61Q9BV99 259 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 LGR4Q9BXB1 951 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 TLR10Q9BXR5 811 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 DPEP2Q9H4A9 486 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 STN1Q9H668 368 aaKnown RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 FGF22Q9HCT0 170 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 BPIFA1Q9NP55 256 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 TRNAU1APQ9NX07 287 aaKnown RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 VPS18Q9P253 973 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 ZNHIT2Q9UHR6 403 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 APPL1Q9UKG1 709 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 SUFUQ9UMX1 484 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 DRG1Q9Y295 367 aaKnown RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 R3HDM2Q9Y2K5 976 aaKnown RBP8.27□□□□□ -1.09
PSEN1-209ENST00000553855 CEP250Q9BV73 2442 aa8.27□□□□□ -1.09
PSEN1-209ENST00000553855 CACNA1EQ15878 2313 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 GLYATL1P3A0A0U1RQE8 302 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 A0A0U1RQS6 177 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TCRBV7S2A1N4TA0A589 114 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 GPR89AB7ZAQ6 455 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TRIM38O00635 465 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 YY2O15391 372 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 CEACAM5P06731 702 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 GP1BAP07359 652 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 THBS1P07996 1170 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 GPR89BP0CG08 455 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 RALBP11234 206 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 CKMT1AP12532 417 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 SLC2A4P14672 509 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 JUPP14923 745 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 BPIP17213 487 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 TCP1P17987 556 aaKnown RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 VCLP18206 1134 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 ATF4P18848 351 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-209ENST00000553855 ACP1P24666 158 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 PMLP29590 882 aa8.26□□□□□ -1.09
PSEN1-209ENST00000553855 ACTR1BP42025 376 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms