RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TFB2MQ9H5Q4 396 aaKnown RBP19.37■□□□□ 0.69
RBFOX1-215ENST00000553186 ACSS2Q9NR19 701 aa19.37■□□□□ 0.69
RBFOX1-215ENST00000553186 SMOXQ9NWM0 555 aa19.37■□□□□ 0.69
RBFOX1-215ENST00000553186 ZDHHC3Q9NYG2 299 aa19.37■□□□□ 0.69
RBFOX1-215ENST00000553186 GNPTGQ9UJJ9 305 aa19.37■□□□□ 0.69
RBFOX1-215ENST00000553186 IKZF3Q9UKT9 509 aa19.37■□□□□ 0.69
RBFOX1-215ENST00000553186 DNAJC16Q9Y2G8 782 aa19.37■□□□□ 0.69
RBFOX1-215ENST00000553186 DHRS7Q9Y394 339 aa19.37■□□□□ 0.69
RBFOX1-215ENST00000553186 RGSL1A5PLK6 1076 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 KITP10721 976 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 KIR2DL1P43626 348 aaPredicted RBP19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 HENMT1Q5T8I9 393 aaKnown RBP19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 PTRHD1Q6GMV3 140 aaKnown RBP19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 NKAPQ8N5F7 415 aaKnown RBP19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 FAM161BQ96MY7 647 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 A8MT66 165 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 C2CD4DB7Z1M9 353 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 PLK4O00444 970 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 IPO13O94829 963 aaKnown RBP19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 ADRB3P13945 408 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 NSG1P42857 185 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 TNFRSF4P43489 277 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 UGT3A1Q6NUS8 523 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 FBXL19Q6PCT2 694 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 DSG4Q86SJ6 1040 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 SUGP1Q8IWZ8 645 aaKnown RBP19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 FITM2Q8N6M3 262 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 ZNF513Q8N8E2 541 aaPredicted RBP19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 LKAAEAR1Q8TD35 194 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 KIAA1191Q96A73 305 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 ULK4Q96C45 1275 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 ERLEC1Q96DZ1 483 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 PPP1R16AQ96I34 528 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 ATOH8Q96SQ7 321 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 COPS8Q99627 209 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 SPATA16Q9BXB7 569 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 CDH19Q9H159 772 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 ABCG8Q9H221 673 aa19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 COLQQ9Y215 455 aaPredicted RBP19.36■□□□□ 0.69
RBFOX1-215ENST00000553186 H0Y858 1186 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 ELFN1P0C7U0 828 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 MTHFD2P13995 350 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 CTHP32929 405 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 ATP6V0D1P61421 351 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 CPNE9Q8IYJ1 553 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 CHPFQ8IZ52 775 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 PPP4R1Q8TF05 950 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 EEF1AKMT1Q8WVE0 214 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 CCDC126Q96EE4 140 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 TMEM120AQ9BXJ8 343 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 SARS2Q9NP81 518 aaKnown RBP19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 RAD18Q9NS91 495 aa19.35■□□□□ 0.69
RBFOX1-215ENST00000553186 PSMD11O00231 422 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 CHRNGP07510 517 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 CCR10P46092 362 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 LIG3P49916 1009 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 ARFIP2P53365 341 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 IL2P60568 153 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 RCN2Q14257 317 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 SPRED3Q2MJR0 410 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 GPRC6AQ5T6X5 926 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 TRIM67Q6ZTA4 783 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 TMEM237Q96Q45 408 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 RIOK2Q9BVS4 552 aaKnown RBP19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 KDM4CQ9H3R0 1056 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 PNPOQ9NVS9 261 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 KCNK4Q9NYG8 393 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 C1QTNF3-AMACRE9PGA6 284 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 SPECC1L-ADORA2AF8WAN1 911 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 SOX1O00570 391 aaPredicted RBP19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 WASP42768 502 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 NFKB2Q00653 900 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 ASPHQ12797 758 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 CAMK2GQ13555 558 aaPredicted RBP19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 ARL13AQ5H913 290 aaPredicted RBP19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 ERN2Q76MJ5 926 aaKnown RBP19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 LSMEM2Q8N112 164 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 TRAM1L1Q8N609 369 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 LINGO1Q96FE5 620 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 COQ10AQ96MF6 247 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 WRAP53Q9BUR4 548 aaKnown RBP19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 CYP4F12Q9HCS2 524 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 TRPV5Q9NQA5 729 aa19.34■□□□□ 0.69
RBFOX1-215ENST00000553186 FADS2P1A8MWK0 482 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 NPC1O15118 1278 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 KERAO60938 352 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 SLC25A14O95258 325 aaPredicted RBP19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 HSPA4LO95757 839 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 PSMD8P48556 350 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 ELP6Q0PNE2 266 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 TSNQ15631 228 aaKnown RBP19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 CCDC121Q6ZUS5 278 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 PIWIL4Q7Z3Z4 852 aaKnown RBP19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 RAVER1Q8IY67 606 aaKnown RBP19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 ZNF781Q8N8C0 355 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 STAG3L4Q8TBR4 150 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 PHF21BQ96EK2 531 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 PDLIM5Q96HC4 596 aaKnown RBP19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 ZSCAN5AQ9BUG6 496 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 HDAC8Q9BY41 377 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms