RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TRAPPC9Q96Q05 1148 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 PSMB7Q99436 277 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 MENTQ9BUN1 341 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 BRD8Q9H0E9 1235 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 KLHL25Q9H0H3 589 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 SIK2Q9H0K1 926 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 WDR26Q9H7D7 661 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 POPDC2Q9HBU9 364 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 TCF7L1Q9HCS4 588 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 FGF22Q9HCT0 170 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ATP13A1Q9HD20 1204 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 SARS2Q9NP81 518 aaKnown RBP5.12□□□□□ -1.59
CKAP4-203ENST00000553039 PHPT1Q9NRX4 125 aaPredicted RBP5.12□□□□□ -1.59
CKAP4-203ENST00000553039 OLAHQ9NV23 265 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 DMAC2Q9NW81 257 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 KLHL3Q9UH77 587 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 RARRES3Q9UL19 164 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 SNX7Q9UNH6 387 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 TRIM33Q9UPN9 1127 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ITM2BQ9Y287 266 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 STAB1Q9NY15 2570 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ARHGEF17Q96PE2 2063 aaPredicted RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TRBV23OR9-2A0A075B6M9 112 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 A0A0D9SEW6 157 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 A0A0U1RQS6 177 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 OR5K4A6NMS3 321 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 DRGXA6NNA5 263 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 PIK3R2O00459 728 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 MAPK13O15264 365 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CBFA2T2O43439 604 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 STX10O60499 249 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 BUB1BO60566 1050 aaPredicted RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 PGRP06401 933 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CD63P08962 238 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 PAEPP09466 180 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TRIM49P0CI25 452 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TRIM49CP0CI26 452 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 SLC2A4P14672 509 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 AMD1P17707 334 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ADSLP30566 484 aaPredicted RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ACTR1BP42025 376 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TSFMP43897 325 aaKnown RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 GNPDA1P46926 289 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 GCLMP48507 274 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 MEOX1P50221 254 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 GSDMDP57764 484 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ACTR1AP61163 376 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 POLR2LP62875 67 aaKnown RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 YBX1P67809 324 aaKnown RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CTBSQ01459 385 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 OTUD4Q01804 1114 aaKnown RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 HHEXQ03014 270 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ENPEPQ07075 957 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 FOXD4Q12950 439 aaPredicted RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CDC16Q13042 620 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 MLC1Q15049 377 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 BRD3Q15059 726 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 PCOLCEQ15113 449 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 SEPT7Q16181 437 aaKnown RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 UGP2Q16851 508 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 DCAF10Q5QP82 559 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CFAP58Q5T655 872 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 IZUMO3Q5VZ72 239 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 B3GNTL1Q67FW5 361 aaPredicted RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 KRT39Q6A163 491 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 PNCKQ6P2M8 343 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CLEC9AQ6UXN8 241 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF517Q6ZMY9 492 aaPredicted RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 INTS8Q75QN2 995 aaKnown RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 BRAPQ7Z569 592 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CUZD1Q86UP6 607 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TAC4Q86UU9 113 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ZBTB46Q86UZ6 589 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 KIF18BQ86Y91 864 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 RAB43Q86YS6 212 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 MCATQ8IVS2 390 aaKnown RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 MRPL41Q8IXM3 137 aaKnown RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 GALNT16Q8N428 558 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 LZTR1Q8N653 840 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 DNAJB8Q8NHS0 232 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TAS1R2Q8TE23 839 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 MR1Q95460 341 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ZDHHC12Q96GR4 267 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CCDC120Q96HB5 630 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 C9orf72Q96LT7 481 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TTC1Q99614 292 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 WDR77Q9BQA1 342 aaPredicted RBP5.11□□□□□ -1.59
CKAP4-203ENST00000553039 LGR4Q9BXB1 951 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 NLNQ9BYT8 704 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TM6SF2Q9BZW4 377 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 WNT10AQ9GZT5 417 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ENKD1Q9H0I2 346 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 TNMDQ9H2S6 317 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 CUEDC2Q9H467 287 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 THAP9Q9H5L6 903 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 RETREG1Q9H6L5 497 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 WDCPQ9H6R7 721 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 FAM204AQ9H8W3 233 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 ATP13A2Q9NQ11 1180 aa5.11□□□□□ -1.59
CKAP4-203ENST00000553039 WASH6PQ9NQA3 447 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms