RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ZDHHC13Q8IUH4 622 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 CCDC65Q8IXS2 484 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 GUF1Q8N442 669 aaKnown RBP8.16□□□□□ -1.1
PRIM1-208ENST00000552590 SLC38A9Q8NBW4 561 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 ACRBPQ8NEB7 543 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 OR2AP1Q8NGE2 309 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 SLC35F5Q8WV83 523 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 ISG20Q96AZ6 181 aaKnown RBP8.16□□□□□ -1.1
PRIM1-208ENST00000552590 TRIM56Q9BRZ2 755 aaKnown RBP8.16□□□□□ -1.1
PRIM1-208ENST00000552590 MLPHQ9BV36 600 aaPredicted RBP8.16□□□□□ -1.1
PRIM1-208ENST00000552590 NLNQ9BYT8 704 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 GSX2Q9BZM3 304 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 SIK2Q9H0K1 926 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 ATP13A1Q9HD20 1204 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 SARS2Q9NP81 518 aaKnown RBP8.16□□□□□ -1.1
PRIM1-208ENST00000552590 WASH6PQ9NQA3 447 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 OGFRQ9NZT2 677 aa8.16□□□□□ -1.1
PRIM1-208ENST00000552590 O00370 1275 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 FBXO21O94952 628 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 RAB40ALP0C0E4 278 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 MYCLP1P12525 358 aaPredicted RBP8.15□□□□□ -1.1
PRIM1-208ENST00000552590 FOLR1P15328 257 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 HOXC12P31275 282 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 SPAM1P38567 509 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 ARCN1P48444 511 aaKnown RBP8.15□□□□□ -1.1
PRIM1-208ENST00000552590 SNRPD1P62314 119 aaKnown RBP8.15□□□□□ -1.1
PRIM1-208ENST00000552590 C5orf22Q49AR2 442 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 RRAGBQ5VZM2 374 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 HMBOX1Q6NT76 420 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 PNCKQ6P2M8 343 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 LEKR1Q6ZMV7 388 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 SETD3Q86TU7 594 aaPredicted RBP8.15□□□□□ -1.1
PRIM1-208ENST00000552590 RAB43Q86YS6 212 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 CIARTQ8N365 385 aaPredicted RBP8.15□□□□□ -1.1
PRIM1-208ENST00000552590 DNAAF3Q8N9W5 541 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 CATSPER1Q8NEC5 780 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 COG1Q8WTW3 980 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 EEF2KMTQ96G04 330 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 FER1L6-AS2Q96M78 137 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 NT5C1BQ96P26 610 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 GBP5Q96PP8 586 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 BACH2Q9BYV9 841 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 FRMD8Q9BZ67 464 aaPredicted RBP8.15□□□□□ -1.1
PRIM1-208ENST00000552590 FAM204AQ9H8W3 233 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 MPP6Q9NZW5 540 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 SEC14L3Q9UDX4 400 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.15□□□□□ -1.1
PRIM1-208ENST00000552590 SNX10Q9Y5X0 201 aa8.15□□□□□ -1.1
PRIM1-208ENST00000552590 TRIM49BA6NDI0 452 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 FOXO6A8MYZ6 492 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 TOX3O15405 576 aaPredicted RBP8.14□□□□□ -1.11
PRIM1-208ENST00000552590 SLC19A2O60779 497 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 CPNE3O75131 537 aaKnown RBP8.14□□□□□ -1.11
PRIM1-208ENST00000552590 PAGE1O75459 146 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 GSRP00390 522 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 CAPN1P07384 714 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 SLC2A3P11169 496 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 NELFEP18615 380 aaKnown RBP8.14□□□□□ -1.11
PRIM1-208ENST00000552590 MST1P26927 711 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 ERCC5P28715 1186 aaPredicted RBP8.14□□□□□ -1.11
PRIM1-208ENST00000552590 OR1E1P30953 314 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 CCR1P32246 355 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 GCLMP48507 274 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 SNRPFP62306 86 aaKnown RBP8.14□□□□□ -1.11
PRIM1-208ENST00000552590 MYBPHQ13203 477 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 POLD3Q15054 466 aaPredicted RBP8.14□□□□□ -1.11
PRIM1-208ENST00000552590 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 CACHD1Q5VU97 1274 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 C12orf56Q8IXR9 622 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 FAM184AQ8NB25 1140 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 NETO2Q8NC67 525 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 CA5BP1Q8WTZ4 195 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 KLHL6Q8WZ60 621 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 SH3KBP1Q96B97 665 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 MBD6Q96DN6 1003 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 FCRL4Q96PJ5 515 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 TKTL2Q9H0I9 626 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 ANKRD12Q6UB98 2062 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 DOCK4Q8N1I0 1966 aa8.14□□□□□ -1.11
PRIM1-208ENST00000552590 CUTAO60888 179 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 SCRG1O75711 98 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 WISP2O76076 250 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 ALX3O95076 343 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 KLK3P07288 261 aaPredicted RBP8.13□□□□□ -1.11
PRIM1-208ENST00000552590 NFKB1P19838 968 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 MMP12P39900 470 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 RBPJQ06330 500 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 UGP2Q16851 508 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 PLEKHS1Q5SXH7 462 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 RPUSD3Q6P087 351 aaKnown RBP8.13□□□□□ -1.11
PRIM1-208ENST00000552590 DOK6Q6PKX4 331 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 IGFL2Q6UWQ7 119 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 C16orf47Q6ZP98 133 aaPredicted RBP8.13□□□□□ -1.11
PRIM1-208ENST00000552590 FAM92BQ6ZTR7 304 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 TECPR1Q7Z6L1 1165 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 TTC39CQ8N584 583 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 OR1N1Q8NGS0 311 aa8.13□□□□□ -1.11
PRIM1-208ENST00000552590 ARHGEF2Q92974 986 aaKnown RBP8.13□□□□□ -1.11
PRIM1-208ENST00000552590 RMND5BQ96G75 393 aaPredicted RBP8.13□□□□□ -1.11
PRIM1-208ENST00000552590 COX4I2Q96KJ9 171 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms