RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ZNF486Q96H40 463 aaPredicted RBP10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 ZNF419Q96HQ0 510 aaPredicted RBP10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 C8orf48Q96LL4 319 aa10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 APOL2Q9BQE5 337 aa10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 HOXD1Q9GZZ0 328 aa10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 NDFIP2Q9NV92 336 aa10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 ZNF639Q9UID6 485 aa10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 NUDT5Q9UKK9 219 aa10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 PRG3Q9Y2Y8 225 aaPredicted RBP10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 UGT2A1Q9Y4X1 527 aa10.96□□□□□ -0.65
TUBA1C-209ENST00000552448 SCN5AQ14524 2016 aa10.96□□□□□ -0.66
TUBA1C-209ENST00000552448 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.66
TUBA1C-209ENST00000552448 MYO16Q9Y6X6 1858 aa10.96□□□□□ -0.66
TUBA1C-209ENST00000552448 SAGE2PA6NJ88 616 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MATN3O15232 486 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 ACOX3O15254 700 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 UGT2B11O75310 529 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 GPC4O75487 556 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 KRT6AP02538 564 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 ALBP02768 609 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 KRT6BP04259 564 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 EEF1B2P24534 225 aaKnown RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 CD40LGP29965 261 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 GPR15P49685 360 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 RAD23AP54725 363 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 TPTEP56180 551 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 NRG1Q02297 640 aaPredicted RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 ELAVL2Q12926 359 aaKnown RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 PRPSAP1Q14558 356 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 SF3B4Q15427 424 aaKnown RBP eCLIP10.95□□□□□ -0.661e-9■■□□□ 14.1
TUBA1C-209ENST00000552448 SMAD1Q15797 465 aaKnown RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 VARS2Q5ST30 1063 aaKnown RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 SDHAF4Q5VUM1 108 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 AFMIDQ63HM1 303 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 TMEM198Q66K66 360 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MSANTD2Q6P1R3 559 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 CRTC3Q6UUV7 619 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 CYP2R1Q6VVX0 501 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 GK5Q6ZS86 529 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 CMC1Q7Z7K0 106 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 C14orf80Q86SX3 495 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MON1AQ86VX9 555 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 NPAS4Q8IUM7 802 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 IQCF2Q8IXL9 164 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 DDIASQ8IXT1 998 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 PLD6Q8N2A8 252 aaKnown RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 ATPAF2Q8N5M1 289 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 KDM1BQ8NB78 822 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 AGR3Q8TD06 166 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 USP33Q8TEY7 942 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 HDAC2Q92769 488 aaKnown RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 SLC39A13Q96H72 371 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 SERPINB11Q96P15 392 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 IL12RB2Q99665 862 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 SH3GL1Q99961 368 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 TMEM175Q9BSA9 504 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 SLC39A8Q9C0K1 460 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 OR2B2Q9GZK3 357 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 TASP1Q9H6P5 420 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 CATSPERBQ9H7T0 1116 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MEAF6Q9HAF1 191 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 NECTIN3Q9NQS3 549 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 IL37Q9NZH6 218 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 UBP1Q9NZI7 540 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 ABCD2Q9UBJ2 740 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MTRRQ9UBK8 725 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 ENPP5Q9UJA9 477 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 VWA7Q9Y334 891 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 NDUFAF1Q9Y375 327 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 HS3ST4Q9Y661 456 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 PLXNA3P51805 1871 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 TTC24A2A3L6 582 aaPredicted RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 GOLGA8CPA6NN73 597 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 E9PAM4 449 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 PSMD3O43242 534 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 DYRK3O43781 588 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 IDH3BO43837 385 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 S100BP04271 92 aaPredicted RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 BMP1P13497 986 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 TPH1P17752 444 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 DNAJB2P25686 324 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 IL12AP29459 219 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MAGEA11P43364 429 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 ARCN1P48444 511 aaKnown RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 CSRP3P50461 194 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 ATN1P54259 1190 aaPredicted RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 NAGLUP54802 743 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MLLT6P55198 1093 aaPredicted RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 PHC1P78364 1004 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 TNK2Q07912 1038 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 CD300CQ08708 224 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 GALNT1Q10472 559 aaPredicted RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 CDH17Q12864 832 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 MRPL58Q14197 206 aaKnown RBP10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 E2F2Q14209 437 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 AGKQ53H12 422 aa10.95□□□□□ -0.66
TUBA1C-209ENST00000552448 COQ5Q5HYK3 327 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms