RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 KCTD16Q68DU8 428 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 ZCCHC8Q6NZY4 707 aaKnown RBP10.51□□□□□ -0.73
PTCH1-225ENST00000551845 NYAP1Q6ZVC0 841 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 SYDE1Q6ZW31 735 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-225ENST00000551845 CHST15Q7LFX5 561 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-225ENST00000551845 SNX20Q7Z614 316 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 PCGF5Q86SE9 256 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 ADGRG6Q86SQ4 1221 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 GPBAR1Q8TDU6 330 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 SLCO2A1Q92959 643 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 OR2M4Q96R27 311 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 RANBP9Q96S59 729 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 IL22Q9GZX6 179 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 OR2AG1Q9H205 316 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 DPEP2Q9H4A9 486 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 NLE1Q9NVX2 485 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-225ENST00000551845 ATXN10Q9UBB4 475 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 GULP1Q9UBP9 304 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 FKBPLQ9UIM3 349 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 RIMKLBQ9ULI2 386 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 GPR34Q9UPC5 381 aa10.51□□□□□ -0.73
PTCH1-225ENST00000551845 OAS3Q9Y6K5 1087 aaKnown RBP10.51□□□□□ -0.73
PTCH1-225ENST00000551845 PCDH15Q96QU1 1955 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 KNL1Q8NG31 2342 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 MAGEB16A2A368 324 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 H7C0S8 307 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 KIF2AO00139 706 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 FANCGO15287 622 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 MTX2O75431 263 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 PRAMEF1O95521 474 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 CELA2BP08218 269 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 RALBP11234 206 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 CKMT1AP12532 417 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ZNF8P17098 575 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 MSH3P20585 1137 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ITGALP20701 1170 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ACP1P24666 158 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 MC4RP32245 332 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 MAGEA6P43360 314 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ZNF140P52738 457 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 XIAPP98170 497 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 E2F1Q01094 437 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 DR1Q01658 176 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ILKQ13418 452 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 NFATC2Q13469 925 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 TCEA2Q15560 299 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 KCTD19Q17RG1 926 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 PROX2Q3B8N5 592 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 CCDC38Q502W7 563 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 CCDC157Q569K6 752 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ZRANB3Q5FWF4 1079 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 C6orf132Q5T0Z8 1188 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ZNF648Q5T619 568 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 TSTD2Q5T7W7 516 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 OGFOD3Q6PK18 319 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 TAS2R42Q7RTR8 314 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 RAB44Q7Z6P3 723 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 SLCO6A1Q86UG4 719 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 MCUQ8NE86 351 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 PPHLN1Q8NEY8 458 aaKnown RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 CCL4L1Q8NHW4 92 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 PTCD2Q8WV60 388 aaKnown RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 HEXDCQ8WVB3 486 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 CPT1BQ92523 772 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 PEX13Q92968 403 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ULK4Q96C45 1275 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 DCUN1D1Q96GG9 259 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 DNAJC1Q96KC8 554 aaKnown RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 C16orf45Q96MC5 204 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 BBC3Q96PG8 261 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 TTC1Q99614 292 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 BOCQ9BWV1 1114 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ZCCHC2Q9C0B9 1178 aaKnown RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ARFGAP3Q9NP61 516 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 CHRAC1Q9NRG0 131 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ASIC3Q9UHC3 531 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 CRLS1Q9UJA2 301 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 TMPRSS11EQ9UL52 423 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 PADI4Q9UM07 663 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 PCDHGA1Q9Y5H4 931 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 LAMA1P25391 3075 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ADAMTS9Q9P2N4 1935 aa10.5□□□□□ -0.73
PTCH1-225ENST00000551845 ASCC3Q8N3C0 2202 aaKnown RBP10.5□□□□□ -0.73
PTCH1-225ENST00000551845 TCRBV7S3A2A0A539 114 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 CPED1A4D0V7 1026 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 EME2A4GXA9 379 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-225ENST00000551845 SDR42E2A6NKP2 422 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 AGAP14A8MT82 685 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 CFAP99D6REC4 459 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 GAPDHSO14556 408 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-225ENST00000551845 CHUKO15111 745 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 KMOO15229 486 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 KCNJ13O60928 360 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 URI1O94763 535 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-225ENST00000551845 CAPNS1P04632 268 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 FTH1P19P0C7X4 201 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 MLNP12872 115 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 PSMA3P25788 255 aa10.49□□□□□ -0.73
PTCH1-225ENST00000551845 AK4P27144 223 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-225ENST00000551845 ACTR1BP42025 376 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms