RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 H3BQ06 376 aaPredicted RBP5.41□□□□□ -1.54
CPSF6-206ENST00000550987 UBE2CO00762 179 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 HSPB6O14558 160 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 GGPS1O95749 300 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ABCB1P08183 1280 aaPredicted RBP5.41□□□□□ -1.54
CPSF6-206ENST00000550987 FAM90A13PP0C7W8 464 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 FAM90A24PP0C7X0 464 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 HOXA13P31271 388 aaPredicted RBP5.41□□□□□ -1.54
CPSF6-206ENST00000550987 CLCN3P51790 818 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ADIPOQQ15848 244 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 KYNUQ16719 465 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 PROSER3Q2NL68 480 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 C15orf59Q2T9L4 293 aaPredicted RBP5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ASTE1Q2TB18 679 aaPredicted RBP5.41□□□□□ -1.54
CPSF6-206ENST00000550987 TCP11X2Q5H9J9 407 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 C9orf152Q5JTZ5 239 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 IGFL4Q6B9Z1 124 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ADALQ6DHV7 355 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF627Q7L945 461 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 GALNTL5Q7Z4T8 443 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 KBTBD6Q86V97 674 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 DDIASQ8IXT1 998 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ZDHHC23Q8IYP9 409 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 RAET1EQ8TD07 263 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF398Q8TD17 642 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 WIPF2Q8TF74 440 aaPredicted RBP5.41□□□□□ -1.54
CPSF6-206ENST00000550987 FBXL8Q96CD0 374 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 OR2A14Q96R47 310 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 PIMREGQ9BSJ6 248 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 TUBB6Q9BUF5 446 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF747Q9BV97 191 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 KIFC3Q9BVG8 833 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 SLC28A3Q9HAS3 691 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 GRPEL1Q9HAV7 217 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 LTB4R2Q9NPC1 389 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 SETD4Q9NVD3 440 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 MARCH4Q9P2E8 410 aaPredicted RBP5.41□□□□□ -1.54
CPSF6-206ENST00000550987 CMAHPQ9Y471 501 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 TRPV2Q9Y5S1 764 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 GAKO14976 1311 aa5.41□□□□□ -1.54
CPSF6-206ENST00000550987 ABCA2Q9BZC7 2435 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 IGF2RP11717 2491 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 TRBV5-7A0A0A0MS05 114 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 F8W810 466 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 CLGNO14967 610 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 AVILO75366 819 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 CSPG5O95196 566 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 TUBBP07437 444 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 MMP3P08254 477 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 ACTN1P12814 892 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 UNGP13051 313 aaPredicted RBP5.4□□□□□ -1.54
CPSF6-206ENST00000550987 SRD5A1P18405 259 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 PON1P27169 355 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 SHMT1P34896 483 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 NAE1Q13564 534 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 COG2Q14746 738 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 SHBQ15464 509 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 USP41Q3LFD5 358 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 C6orf141Q5SZD1 244 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 HECTD3Q5T447 861 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 FCRLBQ6BAA4 426 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 KRT80Q6KB66 452 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 GALNT13Q8IUC8 556 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 FAM217AQ8IXS0 508 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 PARP16Q8N5Y8 322 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 IL17RCQ8NAC3 791 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 OR14L1PQ8NHC6 308 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 HUS1BQ8NHY5 278 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 PIGBQ92521 554 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 VMP1Q96GC9 406 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 VCPIP1Q96JH7 1222 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 PAFAH2Q99487 392 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 TMEM47Q9BQJ4 181 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 ADPGKQ9BRR6 497 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 TKTL2Q9H0I9 626 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 ERVMER34-1Q9H9K5 563 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 PNRC2Q9NPJ4 139 aaKnown RBP5.4□□□□□ -1.54
CPSF6-206ENST00000550987 RNF146Q9NTX7 359 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 TMEM45AQ9NWC5 275 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 ERVK-11Q9UQG0 969 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 A3GALT2U3KPV4 340 aa5.4□□□□□ -1.54
CPSF6-206ENST00000550987 PRRC2BQ5JSZ5 2229 aaKnown RBP5.4□□□□□ -1.55
CPSF6-206ENST00000550987 A6NL46 340 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 SRRM3A6NNA2 597 aaPredicted RBP5.39□□□□□ -1.55
CPSF6-206ENST00000550987 RAMP2O60895 175 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 MITFO75030 526 aaPredicted RBP5.39□□□□□ -1.55
CPSF6-206ENST00000550987 TBX10O75333 385 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 RGS11O94810 467 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 TOP3BO95985 862 aaKnown RBP5.39□□□□□ -1.55
CPSF6-206ENST00000550987 CBSLP0DN79 551 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 MYBL1P10243 752 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 ENO3P13929 434 aaPredicted RBP5.39□□□□□ -1.55
CPSF6-206ENST00000550987 TBXAS1P24557 533 aaPredicted RBP5.39□□□□□ -1.55
CPSF6-206ENST00000550987 CTNNA1P35221 906 aaKnown RBP5.39□□□□□ -1.55
CPSF6-206ENST00000550987 CBSP35520 551 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 GHRHRQ02643 423 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 GAD2Q05329 585 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 KCNC3Q14003 757 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 LRRC26Q2I0M4 334 aa5.39□□□□□ -1.55
CPSF6-206ENST00000550987 KRT24Q2M2I5 525 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms