RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 I6L893 689 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 MYO1CO00159 1063 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 PRKCGP05129 697 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 FESP07332 822 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 HSP90AA1P07900 732 aaKnown RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 PNMA6AP0CW24 399 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 CD58P19256 250 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 LMO1P25800 156 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 PSMC2P35998 433 aaKnown RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 FMO5P49326 533 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 SGSHP51688 502 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 AGFG1P52594 562 aaKnown RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 PITX1P78337 314 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 NUCB2P80303 420 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 MYO1EQ12965 1108 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 BIRC3Q13489 604 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 EIF4EBP2Q13542 120 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 RUNX3Q13761 415 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 PLEKHG6Q3KR16 790 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ZNF528Q3MIS6 628 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ANO6Q4KMQ2 910 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ARHGAP29Q52LW3 1261 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ARHGAP17Q68EM7 881 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ANKRD16Q6P6B7 361 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 GJB7Q6PEY0 223 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 RHBDF2Q6PJF5 856 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 NPNTQ6UXI9 565 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 STXBP4Q6ZWJ1 553 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 INTS8Q75QN2 995 aaKnown RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 OVCH2Q7RTZ1 564 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ITIH5Q86UX2 942 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 METTL23Q86XA0 190 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 BBS7Q8IWZ6 715 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 FAM217AQ8IXS0 508 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 THEM5Q8N1Q8 247 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 SLC15A4Q8N697 577 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 OR6B3Q8NGW1 331 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 WFDC5Q8TCV5 224 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 CLEC4CQ8WTT0 213 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 FAM3CQ92520 227 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 TAF4BQ92750 862 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 SMARCD1Q96GM5 515 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 LMLNQ96KR4 655 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 CEP295NLQ96MC4 621 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 FNBP1Q96RU3 617 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 MMS19Q96T76 1030 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 MESP1Q9BRJ9 268 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ECT2Q9H8V3 914 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 KIF9Q9HAQ2 790 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 GLOD4Q9HC38 313 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 DMAP1Q9NPF5 467 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 ZDHHC4Q9NPG8 344 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 RXFP3Q9NSD7 469 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 CISHQ9NSE2 258 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 FBXO4Q9UKT5 387 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 CPQQ9Y646 472 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 SPENQ96T58 3664 aaKnown RBP5.06□□□□□ -1.6
SCAF11-214ENST00000550893 BSNQ9UPA5 3926 aa5.06□□□□□ -1.6
SCAF11-214ENST00000550893 PLXNB3Q9ULL4 1909 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 A0A087WWL8 130 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 A1L4Q6 167 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 QSOX1O00391 747 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 BTN3A1O00481 513 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ZNF263O14978 683 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 EPHB6O15197 1021 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CALUO43852 315 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 TUSC2O75896 110 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ONECUT2O95948 504 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 IGLV3-27P01718 113 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CISD3P0C7P0 127 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CDK4P11802 303 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ADORA2BP29275 332 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 GTF2H1P32780 548 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ABCG1P45844 678 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 TUBP50607 506 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 AP3M2P53677 418 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ATXN1P54253 815 aaKnown RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 WNT3P56703 355 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 STX17P56962 302 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 MAP3K7CLP57077 242 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 EEFSECP57772 596 aaKnown RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 RPL10AP62906 217 aaKnown RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 TNNC1P63316 161 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 LRRC63Q05C16 580 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CTBP1Q13363 440 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 CUL2Q13617 745 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 VEPH1Q14D04 833 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 SGSM1Q2NKQ1 1148 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ITPRIPL2Q3MIP1 535 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ZIK1Q3SY52 487 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 AARS2Q5JTZ9 985 aaKnown RBP5.05□□□□□ -1.6
SCAF11-214ENST00000550893 TMEM215Q68D42 235 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 KRT39Q6A163 491 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 SUMO4Q6EEV6 95 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 PM20D1Q6GTS8 502 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 TRNP1Q6NT89 227 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 ZNF783Q6ZMS7 281 aa5.05□□□□□ -1.6
SCAF11-214ENST00000550893 C4orf50Q6ZRC1 276 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms