RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 UPK3BL2E5RIL1 263 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 MMP20O60882 483 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 KRT8P05787 483 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 SLC35G6P0C7Q6 338 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 PSMA3P25788 255 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 RPL3P39023 403 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 SLC1A6P48664 564 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 RPS7P62081 194 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 EIF4HQ15056 248 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 MRPL10Q7Z7H8 261 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 NIPA2Q8N8Q9 360 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 SLC35F5Q8WV83 523 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 MYH11P35749 1972 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 BCLAF3A2AJT9 711 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 FFAR2O15552 330 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 AP2A1O95782 977 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 JMJD7P0C870 316 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 UMPSP11172 480 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 NDUFS1P28331 727 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 S100A5P33763 92 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 NSG1P42857 185 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 DEFA1P59665 94 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 DEFA3P59666 94 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 CHRNB3Q05901 458 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 INCA1Q0VD86 236 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 LPAL2Q16609 132 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 ALG11Q2TAA5 492 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 RNASEH2BQ5TBB1 312 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 C16orf46Q6P387 395 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 KYAT3Q6YP21 454 aaKnown RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 CYP2U1Q7Z449 544 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 RASGRP3Q8IV61 690 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF567Q8N184 647 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 CDYL2Q8N8U2 506 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 FAM13CQ8NE31 585 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 PRICKLE1Q96MT3 831 aaPredicted RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF317Q96PQ6 595 aaPredicted RBP12.11□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF229Q9UJW7 825 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF232Q9UNY5 417 aa12.11□□□□□ -0.47
NR4A1-215ENST00000550557 FAM237BA0A1B0GVD1 139 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 TPST1O60507 370 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 KRT36O76013 467 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 CD48P09326 243 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 PSMD7P51665 324 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 PON2Q15165 354 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 PLEKHG6Q3KR16 790 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 EMC10Q5UCC4 262 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 MSANTD2Q6P1R3 559 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 TAS1R3Q7RTX0 852 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 KRT73Q86Y46 540 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 MRPL43Q8N983 215 aaKnown RBP12.1□□□□□ -0.47
NR4A1-215ENST00000550557 OR10T2Q8NGX3 314 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 KCTD4Q8WVF5 259 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 HIC2Q96JB3 615 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 CCT7Q99832 543 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 DPYSL5Q9BPU6 564 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 RIOK2Q9BVS4 552 aaKnown RBP12.1□□□□□ -0.47
NR4A1-215ENST00000550557 LMAN1LQ9HAT1 526 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 CCDC177Q9NQR7 707 aaPredicted RBP12.1□□□□□ -0.47
NR4A1-215ENST00000550557 PIGNO95427 931 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 VARSP26640 1264 aaKnown RBP12.1□□□□□ -0.47
NR4A1-215ENST00000550557 MASP1P48740 699 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 DHCR24Q15392 516 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 ALFQ53S48 1182 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 TJAP1Q5JTD0 557 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 ADCK1Q86TW2 530 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 TCAIMQ8N3R3 496 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 TRPV1Q8NER1 839 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 FOXJ1Q92949 421 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 PRRG4Q9BZD6 226 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 ADNPQ9H2P0 1102 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 GDE1Q9NZC3 331 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 GTF2A1LQ9UNN4 478 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 DDX60LQ5H9U9 1706 aaKnown RBP12.1□□□□□ -0.47
NR4A1-215ENST00000550557 GON4LQ3T8J9 2241 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 ZNF840PA6NDX5 716 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 OAZ2O95190 189 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 SHHQ15465 462 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 TXNDC5Q8NBS9 432 aaKnown RBP12.1□□□□□ -0.47
NR4A1-215ENST00000550557 SEC14L1Q92503 715 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 CPT1BQ92523 772 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 IMPAD1Q9NX62 359 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 SCN3BQ9NY72 215 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 AP4S1Q9Y587 144 aa12.1□□□□□ -0.47
NR4A1-215ENST00000550557 LRRC14BA6NHZ5 514 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 CCL22O00626 93 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 AGXTP21549 392 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 NTSR1P30989 418 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 ACVRL1P37023 503 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 NUP107P57740 925 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 BIKQ13323 160 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 ALKBH2Q6NS38 261 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 GPRIN3Q6ZVF9 776 aa12.09□□□□□ -0.47
NR4A1-215ENST00000550557 NET1Q7Z628 596 aaPredicted RBP12.09□□□□□ -0.47
NR4A1-215ENST00000550557 SPPL2AQ8TCT8 520 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms