RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CDC20Q12834 499 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 GALNT3Q14435 633 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 ZNF648Q5T619 568 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 LUZP1Q86V48 1076 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 PLD5Q8N7P1 536 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 GPR26Q8NDV2 337 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 SPATA16Q9BXB7 569 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 OR2AG1Q9H205 316 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 KLC4Q9NSK0 619 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 OGFRQ9NZT2 677 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 SCHIP1Q9P0W5 487 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 NFKBIL1Q9UBC1 381 aaPredicted RBP21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 FLNCQ14315 2725 aa21.41■■□□□ 1.02
SMARCC2-210ENST00000550519 CHUKO15111 745 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 C9P02748 559 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 H2AFZP0C0S5 128 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 TPM4P67936 248 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 MAP7Q14244 749 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 CRTC2Q53ET0 693 aaPredicted RBP21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 ZNF569Q5MCW4 686 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 H2AFVQ71UI9 128 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 TMC3Q7Z5M5 1100 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 ADGRG6Q86SQ4 1221 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 ZNF830Q96NB3 372 aaPredicted RBP21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 ZSCAN5AQ9BUG6 496 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 PACSIN1Q9BY11 444 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 MAGEE1Q9HCI5 957 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 SLC23A2Q9UGH3 650 aa21.4■■□□□ 1.02
SMARCC2-210ENST00000550519 PRR19A6NJB7 356 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 ZNF487B1APH4 448 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 PRKAR1AP10644 381 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 OAS2P29728 719 aaKnown RBP21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 HNRNPH3P31942 346 aaKnown RBP21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 GFERP55789 205 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 ALS2CLQ60I27 953 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 PDPK2PQ6A1A2 396 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 TMEM26Q6ZUK4 368 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 KDELC2Q7Z4H8 507 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 TRAM1L1Q8N609 369 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 CTNNBL1Q8WYA6 563 aaPredicted RBP21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 GLYATL1Q969I3 302 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 TADA1Q96BN2 335 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 IMP4Q96G21 291 aaKnown RBP21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 C9orf72Q96LT7 481 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 EPN3Q9H201 632 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 OSGEPL1Q9H4B0 414 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 RAD18Q9NS91 495 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 SHOC2Q9UQ13 582 aa21.39■■□□□ 1.01
SMARCC2-210ENST00000550519 PIRTP0C851 137 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC19A1P41440 591 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 STAT5AP42229 794 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 MC1RQ01726 317 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 SKIDA1Q1XH10 827 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 FAM182AQ5T1J6 154 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 ZFYVE27Q5T4F4 411 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC9A4Q6AI14 798 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 CRTC3Q6UUV7 619 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 ESX1Q8N693 406 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 STARD8Q92502 1023 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 CEP41Q9BYV8 373 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 ZNF624Q9P2J8 865 aaPredicted RBP21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 HEY1Q9Y5J3 304 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC30A1Q9Y6M5 507 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 COL12A1Q99715 3063 aa21.38■■□□□ 1.01
SMARCC2-210ENST00000550519 C3orf70A6NLC5 250 aaPredicted RBP21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 KMOO15229 486 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 TOX3O15405 576 aaPredicted RBP21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 MTA2O94776 668 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 UBXN7O94888 489 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 ZNF7P17097 686 aaPredicted RBP21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 CASP14P31944 242 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC18A3Q16572 532 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 INSCQ1MX18 579 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 COLEC12Q5KU26 742 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 NT5DC3Q86UY8 548 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 VSIG1Q86XK7 387 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 C9orf43Q8TAL5 461 aaPredicted RBP21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 APOBEC4Q8WW27 367 aaKnown RBP21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 OLFM3Q96PB7 478 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 TIMM29Q9BSF4 260 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 BRD8Q9H0E9 1235 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC25A51Q9H1U9 297 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 ANAPC2Q9UJX6 822 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 ZNF711Q9Y462 761 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 RPS6KL1Q9Y6S9 549 aa21.37■■□□□ 1.01
SMARCC2-210ENST00000550519 LRRD1A4D1F6 860 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 VIPP01282 170 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 BRAFP15056 766 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 BPIP17213 487 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 TYRP1P17643 537 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 CASRP41180 1078 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 CDK18Q07002 472 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 AP1B1Q10567 949 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 MESDQ14696 234 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC14A2Q15849 920 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 ASTE1Q2TB18 679 aaPredicted RBP21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 ABRAXAS1Q6UWZ7 409 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 LRRTM4Q86VH4 590 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 ZNF547Q8IVP9 402 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 AGAP3Q96P47 875 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms