RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 KBTBD6Q86V97 674 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SATL1Q86VE3 508 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ZNF410Q86VK4 478 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 CRLF3Q8IUI8 442 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 C12orf56Q8IXR9 622 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 FAM71AQ8IYT1 594 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ZNF34Q8IZ26 560 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 RCOR2Q8IZ40 523 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SAMD3Q8N6K7 520 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 RBM15BQ8NDT2 890 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 DDHD1Q8NEL9 900 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 PRSS3P2Q8NHM4 247 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 EXD1Q8NHP7 514 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 RP9Q8TA86 221 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 DEPTORQ8TB45 409 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ZCRB1Q8TBF4 217 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ZNF564Q8TBZ8 553 aaPredicted RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SDR42E1Q8WUS8 393 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 KRT35Q92764 455 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 DDX17Q92841 729 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 CASP10Q92851 521 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ABTB1Q969K4 478 aaPredicted RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 COQ8BQ96D53 544 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ARHGEF26Q96DR7 871 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 APOPT1Q96IL0 206 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 VCPIP1Q96JH7 1222 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 FAM20AQ96MK3 541 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 MBOAT7Q96N66 472 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 PANX3Q96QZ0 392 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 KCNK16Q96T55 309 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 CCT7Q99832 543 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 DDX50Q9BQ39 737 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 THTPAQ9BU02 230 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 NUP85Q9BW27 656 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 TMEM120AQ9BXJ8 343 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 TDRD1Q9BXT4 1180 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 KCNK13Q9HB14 408 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 PARVBQ9HBI1 364 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 MLXIPLQ9NP71 852 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SAYSD1Q9NPB0 183 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SLCO1B3Q9NPD5 702 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 PFDN4Q9NQP4 134 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 C8orf4Q9NR00 106 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ATAD3AQ9NVI7 634 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 DMAC2Q9NW81 257 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 MCM9Q9NXL9 1143 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 RRN3Q9NYV6 651 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 TMOD4Q9NZQ9 345 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 TMEM9Q9P0T7 183 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 TBK1Q9UHD2 729 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SLC7A8Q9UHI5 535 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 GNPTGQ9UJJ9 305 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ZNF180Q9UJW8 692 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 VPS28Q9UK41 221 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 PRPF19Q9UMS4 504 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 PSMD13Q9UNM6 376 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SCAF8Q9UPN6 1271 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 LZTS1Q9Y250 596 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 POLHQ9Y253 713 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 TMA7Q9Y2S6 64 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 RABGAP1Q9Y3P9 1069 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 FAM32AQ9Y421 112 aaKnown RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 DTNAQ9Y4J8 743 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 CEPT1Q9Y6K0 416 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 IKBKGQ9Y6K9 419 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ASTN2O75129 1339 aaPredicted RBP3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SPATA31A5Q5VU36 1347 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 SPATA31A7Q8IWB4 1347 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 MYO3BQ8WXR4 1341 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 ARAP2Q8WZ64 1704 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 DOCK2Q92608 1830 aa3.33□□□□□ -1.88
CCNT1-203ENST00000550457 CHD4Q14839 1912 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 MYH13Q9UKX3 1938 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 GOLGA8QA0A0J9YX86 632 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 GOLGA8OA6NCC3 632 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 CCDC160A6NGH7 325 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 ARHGAP42A6NI28 874 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 TRIM64CA6NLI5 447 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 ANKRD63C9JTQ0 380 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 E7ESA3 106 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 GOLGA8NF8WBI6 632 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 H7C1Q1 480 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 FOXN3O00409 490 aaPredicted RBP3.32□□□□□ -1.88
CCNT1-203ENST00000550457 KPNA4O00629 521 aaPredicted RBP3.32□□□□□ -1.88
CCNT1-203ENST00000550457 FBP2O00757 339 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 TRDMT1O14717 391 aaKnown RBP3.32□□□□□ -1.88
CCNT1-203ENST00000550457 ITM2AO43736 263 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 TOM1O60784 492 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 ZC3H11AO75152 810 aaKnown RBP eCLIP3.32□□□□□ -1.88
CCNT1-203ENST00000550457 PROSCO94903 275 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 PARNO95453 639 aaKnown RBP3.32□□□□□ -1.88
CCNT1-203ENST00000550457 LDHCP07864 332 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 TSPY3P0CV98 308 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 TSPY8P0CW00 308 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 SRGAP2BP0DMP2 458 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 CETPP11597 493 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 KRT5P13647 590 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 ETS2P15036 469 aa3.32□□□□□ -1.88
CCNT1-203ENST00000550457 VEGFAP15692 232 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms