RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CRLS1Q9UJA2 301 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 NFU1Q9UMS0 254 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 ST14Q9Y5Y6 855 aa12.91□□□□□ -0.34
RAB5C-206ENST00000550406 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.91□□□□□ -0.34
RAB5C-206ENST00000550406 ARID1BQ8NFD5 2236 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-206ENST00000550406 CABIN1Q9Y6J0 2220 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 ARHGEF17Q96PE2 2063 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-206ENST00000550406 LAMA1P25391 3075 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 A0A1B0GTQ1 180 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 PRSS38A1L453 326 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 SCAMP1O15126 338 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 CD3EAPO15446 510 aaKnown RBP12.9□□□□□ -0.34
RAB5C-206ENST00000550406 ASMTLO95671 621 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 CSF2P04141 144 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 POLBP06746 335 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 IVLP07476 585 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 SYPP08247 313 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 F7P08709 466 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-206ENST00000550406 ACRV1P26436 265 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 HTR1BP28222 390 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 RXRGP48443 463 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 GPX6P59796 221 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 CUL1Q13616 776 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 NAA30Q147X3 362 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-206ENST00000550406 SPANXN3Q5MJ09 141 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 TRMT10BQ6PF06 316 aaKnown RBP12.9□□□□□ -0.34
RAB5C-206ENST00000550406 MARK2Q7KZI7 788 aaKnown RBP12.9□□□□□ -0.34
RAB5C-206ENST00000550406 TAS2R42Q7RTR8 314 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 PARGQ86W56 976 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 CCDC25Q86WR0 208 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 CCNJLQ8IV13 435 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 HID1Q8IV36 788 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 RASGEF1AQ8N9B8 481 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 C9orf72Q96LT7 481 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 ELF4Q99607 663 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-206ENST00000550406 NAT9Q9BTE0 207 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 BOCQ9BWV1 1114 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 ZDHHC5Q9C0B5 715 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 CATSPERZQ9NTU4 200 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 ZDHHC3Q9NYG2 299 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 KLQ9UEF7 1012 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 SUFUQ9UMX1 484 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 PLEKHM1Q9Y4G2 1056 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 PRSS21Q9Y6M0 314 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 DGKBQ9Y6T7 804 aa12.9□□□□□ -0.34
RAB5C-206ENST00000550406 FRYLO94915 3013 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 CHUKO15111 745 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 NUAK1O60285 661 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 GDF9O60383 454 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 OR1I1O60431 355 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 TTC4O95801 387 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 C1QAP02745 245 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 CELA2BP08218 269 aaPredicted RBP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 FAM153BP0C7A2 387 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 ERVK-10P10266 1014 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 NME1P15531 152 aaKnown RBP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 JUNDP17535 347 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 KELP23276 732 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 SSTR1P30872 391 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 HK3P52790 923 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 CTSCP53634 463 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 IL9RQ01113 521 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 FRG1Q14331 258 aaKnown RBP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 HLTFQ14527 1009 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 LONRF1Q17RB8 773 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 ERCC6LQ2NKX8 1250 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 FAM153CQ494X1 144 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 PYCR3Q53H96 274 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 FASTKD1Q53R41 847 aaKnown RBP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 NEPROQ6NW34 567 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 IL27RAQ6UWB1 636 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 RD3Q7Z3Z2 195 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 PHYKPLQ8IUZ5 450 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 ZNF547Q8IVP9 402 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 GSPT2Q8IYD1 628 aaKnown RBP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 PHACTR4Q8IZ21 702 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 MINDY1Q8N5J2 469 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 GPR150Q8NGU9 434 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 GDAP1Q8TB36 358 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 PYROXD1Q8WU10 500 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 ULK4Q96C45 1275 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 GTPBP2Q9BX10 602 aaKnown RBP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 CLPBQ9H078 707 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 TMEM168Q9H0V1 697 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 CYP4F12Q9HCS2 524 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 TM7SF3Q9NS93 570 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 UCKL1Q9NWZ5 548 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 MOCS1Q9NZB8 636 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 VPS18Q9P253 973 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 PRKAB1Q9Y478 270 aa12.89□□□□□ -0.35
RAB5C-206ENST00000550406 ASCC3Q8N3C0 2202 aaKnown RBP12.89□□□□□ -0.35
RAB5C-206ENST00000550406 DNAH14Q0VDD8 3507 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 VEGFDO43915 354 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 GFRA3O60609 400 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 CDK14O94921 469 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 S1PR4O95977 384 aa12.88□□□□□ -0.35
RAB5C-206ENST00000550406 TNFP01375 233 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms