RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 INSCQ1MX18 579 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 MAP9Q49MG5 647 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 C3orf38Q5JPI3 329 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 LDLRAP1Q5SW96 308 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 KCTD11Q693B1 232 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 LRRTM4Q86VH4 590 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 BRSK1Q8TDC3 778 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 SLC37A2Q8TED4 501 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 C1orf54Q8WWF1 131 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 TLR10Q9BXR5 811 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 OSGEPL1Q9H4B0 414 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 POLR1BQ9H9Y6 1135 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 SMOXQ9NWM0 555 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 TMPRSS11EQ9UL52 423 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 ZNF148Q9UQR1 794 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 FAM208BQ5VWN6 2430 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 TMX2-CTNND1H3BSU7 103 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 GAPDHSO14556 408 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 KMOO15229 486 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 GPR39O43194 453 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 PSMD3O43242 534 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 CDK14O94921 469 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 AP2A1O95782 977 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 ACTN2P35609 894 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 GPR3P46089 330 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 FASLGP48023 281 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 LSSP48449 732 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 ZNF140P52738 457 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 PLA2G4EQ3MJ16 856 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 DENND5AQ6IQ26 1287 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 B3GNT8Q7Z7M8 397 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 TRAPPC5Q8IUR0 188 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 SFRP1Q8N474 314 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 DDHD1Q8NEL9 900 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 OR4K2Q8NGD2 314 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 MAIP1Q8WWC4 291 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 LIN37Q96GY3 246 aaPredicted RBP17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 TTC25Q96NG3 672 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 TMEM74Q96NL1 305 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 TIMM29Q9BSF4 260 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 STRADBQ9C0K7 418 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 STN1Q9H668 368 aaKnown RBP17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 TBC1D29Q9UFV1 150 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 SATB2Q9UPW6 733 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 ZKSCAN5Q9Y2L8 839 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 ZFYVE26Q68DK2 2539 aa17.01■□□□□ 0.31
CHMP1A-208ENST00000550102 PIKFYVEQ9Y2I7 2098 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 CCDC187A0A096LP49 1063 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 A6NCN8 305 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 ERI2A8K979 691 aaKnown RBP17■□□□□ 0.31
CHMP1A-208ENST00000550102 SNX2O60749 519 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 DXOO77932 396 aaKnown RBP17■□□□□ 0.31
CHMP1A-208ENST00000550102 EML2O95834 649 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 IFNB1P01574 187 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 F3P13726 295 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 ZNF7P17097 686 aaPredicted RBP17■□□□□ 0.31
CHMP1A-208ENST00000550102 CCKBRP32239 447 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 CLCNKAP51800 687 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 INHBCP55103 352 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 B4GALNT1Q00973 533 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 SNX1Q13596 522 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 PTPRCAPQ14761 206 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 TBC1D25Q3MII6 688 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 GPRC6AQ5T6X5 926 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 LSMEM2Q8N112 164 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 TAB3Q8N5C8 712 aaPredicted RBP17■□□□□ 0.31
CHMP1A-208ENST00000550102 CCDC89Q8N998 374 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 AVL9Q8NBF6 648 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 WDR36Q8NI36 951 aaKnown RBP17■□□□□ 0.31
CHMP1A-208ENST00000550102 ANP32BQ92688 251 aaKnown RBP17■□□□□ 0.31
CHMP1A-208ENST00000550102 C19orf43Q9BQ61 176 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 FOXP3Q9BZS1 431 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 EPB41L5Q9HCM4 733 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 KLC4Q9NSK0 619 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 FKBPLQ9UIM3 349 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 NBEAQ8NFP9 2946 aa17■□□□□ 0.31
CHMP1A-208ENST00000550102 KIR2DS5A0A0G2JLQ3 304 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 A0A0G2JNG1 304 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 KIR2DS3K7RE56 304 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A9O60656 530 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 CPNE6O95741 557 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 FGGP02679 453 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 VCLP18206 1134 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A6P19224 532 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A1P22309 533 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A4P22310 534 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 ALDH4A1P30038 563 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 AKT1P31749 480 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A3P35503 534 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 UGT1A5P35504 534 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 FDFT1P37268 417 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 HADHAP40939 763 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 OR1D5P58170 312 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 TMEM115Q12893 351 aaPredicted RBP16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 NFATC2Q13469 925 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 SEPT6Q14141 434 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 KIR2DS5Q14953 304 aa16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 SIX1Q15475 284 aaPredicted RBP16.99■□□□□ 0.31
CHMP1A-208ENST00000550102 CLPPQ16740 277 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms