RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CHUKO15111 745 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 LIASO43766 372 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 KRT86O43790 486 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 NUDT21O43809 227 aaKnown RBP9.66□□□□□ -0.86
HDAC7-229ENST00000549883 SNX2O60749 519 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 CCDC175P0C221 793 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 HOXB3P14651 431 aaPredicted RBP9.66□□□□□ -0.86
HDAC7-229ENST00000549883 MPSTP25325 297 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 CD1CP29017 333 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 CSF2RBP32927 897 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 CTSCP53634 463 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 TMPRSS15P98073 1019 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 RPS6KA1Q15418 735 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 OASLQ15646 514 aaKnown RBP9.66□□□□□ -0.86
HDAC7-229ENST00000549883 COL28A1Q2UY09 1125 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 ZNF438Q7Z4V0 828 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 C11orf96Q7Z7L8 435 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 TXLNBQ8N3L3 684 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 RASGEF1AQ8N9B8 481 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 CCDC112Q8NEF3 446 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 OR4K2Q8NGD2 314 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 NAF1Q96HR8 494 aaKnown RBP9.66□□□□□ -0.86
HDAC7-229ENST00000549883 PLEKHG4BQ96PX9 1271 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 GFM1Q96RP9 751 aaKnown RBP9.66□□□□□ -0.86
HDAC7-229ENST00000549883 TBL1YQ9BQ87 522 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 CARD9Q9H257 536 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 KCNF1Q9H3M0 494 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 SEMA6CQ9H3T2 930 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 TRABDQ9H4I3 376 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 FAM96AQ9H5X1 160 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 EPB41L5Q9HCM4 733 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 ASCL3Q9NQ33 180 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 KLC4Q9NSK0 619 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 DNAJC16Q9Y2G8 782 aa9.66□□□□□ -0.86
HDAC7-229ENST00000549883 PTPRQQ9UMZ3 2332 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 GLYATL1P3A0A0U1RQE8 302 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 GOLGA6L9A6NEM1 432 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 PRR19A6NJB7 356 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 RHPN2P1A8MT19 583 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 STX7O15400 261 aaKnown RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 LDB2O43679 373 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 TCEA3O75764 348 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 STK10O94804 968 aaKnown RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 CDK14O94921 469 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 ZSCAN5DPP0CG00 497 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 PRSS56P0CW18 603 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 ZNF7P17097 686 aaPredicted RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 CXCR5P32302 372 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 SPAM1P38567 509 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 EIF2S3P41091 472 aaKnown RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 ETV5P41161 510 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 GRIA1P42261 906 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 LSSP48449 732 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 CDKN1CP49918 316 aaPredicted RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 ZNF140P52738 457 aaPredicted RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 XIAPP98170 497 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 ZFP36L1Q07352 338 aaKnown RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 PEX6Q13608 980 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 LRP8Q14114 963 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 PRPSAP1Q14558 356 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 NR1D2Q14995 579 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 SEPT7Q16181 437 aaKnown RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 PARP6Q2NL67 630 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 TBC1D25Q3MII6 688 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 GPRC6AQ5T6X5 926 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 IYDQ6PHW0 289 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 XKR5Q6UX68 686 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 ZNF662Q6ZS27 426 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 ARHGEF18Q6ZSZ5 1173 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 PHYKPLQ8IUZ5 450 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 SLITRK4Q8IW52 837 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 SFRP1Q8N474 314 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 BEND7Q8N7W2 519 aaPredicted RBP9.65□□□□□ -0.86
HDAC7-229ENST00000549883 TTC13Q8NBP0 860 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 VPS35Q96QK1 796 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 OSGEPL1Q9H4B0 414 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 RMI1Q9H9A7 625 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 POLR1BQ9H9Y6 1135 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 RAD18Q9NS91 495 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 HACD3Q9P035 362 aa9.65□□□□□ -0.86
HDAC7-229ENST00000549883 BPTFQ12830 3046 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 IGHV1OR21-1A0A087WYE8 117 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 OR2AG2A6NM03 316 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 SGTAO43765 313 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 TNFSF15O95150 251 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 PRAMEF1O95521 474 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 BRAFP15056 766 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 PNLIPP16233 465 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 ITIH1P19827 911 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 LPOP22079 712 aaPredicted RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 RPL10P27635 214 aaKnown RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 TNNT3P45378 269 aaPredicted RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 DRG2P55039 364 aaKnown RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 INHBCP55103 352 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 CCDC173Q0VFZ6 552 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 TMEM115Q12893 351 aaPredicted RBP9.64□□□□□ -0.87
HDAC7-229ENST00000549883 NFATC2Q13469 925 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 C16orf72Q14CZ0 275 aa9.64□□□□□ -0.87
HDAC7-229ENST00000549883 TAF1AQ15573 450 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms