RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 FAM117BQ6P1L5 589 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 DDX53Q86TM3 631 aaKnown RBP11.02□□□□□ -0.65
LINC00661-204ENST00000549354 LINC00523Q86TU6 105 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 HMCESQ96FZ2 354 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 ZNF558Q96NG5 402 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 GPR78Q96P69 363 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 ALG2Q9H553 416 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 C11orf49Q9H6J7 331 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 GLOD4Q9HC38 313 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 MID2Q9UJV3 735 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 OAZ3Q9UMX2 235 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 ATP11BQ9Y2G3 1177 aa11.02□□□□□ -0.65
LINC00661-204ENST00000549354 KRT87PA6NCN2 255 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 UBFD1O14562 309 aaKnown RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 FFAR3O14843 346 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 GPR42O15529 346 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 SEC24AO95486 1093 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TPD52P55327 224 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 LAPTM5Q13571 262 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 RAB33AQ14088 237 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 LRRC26Q2I0M4 334 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TIGD2Q4W5G0 525 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TMEM214Q6NUQ4 689 aaKnown RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 FBXL22Q6P050 247 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TMEM26Q6ZUK4 368 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 SETD3Q86TU7 594 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TEX26Q8N6G2 289 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 GIPC3Q8TF64 312 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 C12orf43Q96C57 262 aaKnown RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ITCHQ96J02 903 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 PRDM8Q9NQV8 689 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TRAF6Q9Y4K3 522 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TRPC5OSA6NMA1 111 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 H3BNH8 94 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TLR5O60602 858 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ANXA9O76027 345 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 HGFP14210 728 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 CD247P20963 164 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ITGB8P26012 769 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ESRRGP62508 458 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 BNIP3Q12983 259 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 FGD3Q5JSP0 725 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ARMC12Q5T9G4 340 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 NADSYN1Q6IA69 706 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 SNX29P2Q8IUI4 249 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ST13P5Q8NFI4 369 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 DLG3Q92796 817 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TADA1Q96BN2 335 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 PPM1MQ96MI6 270 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 SEMA3CQ99985 751 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 CCSER2Q9H7U1 834 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 POLR1BQ9H9Y6 1135 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 VTI1BQ9UEU0 232 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 SLC12A8A0AV02 714 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TRIM43BA6NCK2 446 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ZNF840PA6NDX5 716 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ANGPT2O15123 496 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 KCNH1O95259 989 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 PENKP01210 267 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 PIM1P11309 404 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 ZNF23P17027 643 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 LAG3P18627 525 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 MAGEA10P43363 369 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 LRP8Q14114 963 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 CYP51A1Q16850 503 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TAS2R42Q7RTR8 314 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 LSRQ86X29 649 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 CDYL2Q8N8U2 506 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 IGSF8Q969P0 613 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 GFM2Q969S9 779 aaKnown RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 TRIM43Q96BQ3 446 aaPredicted RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 CLK4Q9HAZ1 481 aaKnown RBP11.01□□□□□ -0.65
LINC00661-204ENST00000549354 PFDN4Q9NQP4 134 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 DNMT3LQ9UJW3 386 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 PCDHGC4Q9Y5F7 938 aa11.01□□□□□ -0.65
LINC00661-204ENST00000549354 A0A0J9YYE9 177 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 EI24O14681 340 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 PIP5K1BO14986 540 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 LILRB3O75022 631 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ATE1O95260 518 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ATP5F1P24539 256 aaPredicted RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 PPP3CCP48454 512 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 MAPKAPK2P49137 400 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 WDR5P61964 334 aaKnown RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 CARTPTQ16568 116 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 RBBP7Q16576 425 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 SLC44A4Q53GD3 710 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 ANKRD34AQ69YU3 496 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 DENND5AQ6IQ26 1287 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 RNF145Q96MT1 663 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 MCMBPQ9BTE3 642 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 EFHD1Q9BUP0 239 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 KIFC1Q9BW19 673 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 APOL5Q9BWW9 433 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 OSBPL11Q9BXB4 747 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 EPB41L1Q9H4G0 881 aa11□□□□□ -0.65
LINC00661-204ENST00000549354 DUS2Q9NX74 493 aaKnown RBP11□□□□□ -0.65
LINC00661-204ENST00000549354 KIAA0100Q14667 2235 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms