RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 THAP4Q8WY91 577 aa8.39□□□□□ -1.07
TROAP-208ENST00000548817 PNPLA2Q96AD5 504 aa8.39□□□□□ -1.07
TROAP-208ENST00000548817 SCARF2Q96GP6 870 aaPredicted RBP8.39□□□□□ -1.07
TROAP-208ENST00000548817 MCCC1Q96RQ3 725 aaPredicted RBP8.39□□□□□ -1.07
TROAP-208ENST00000548817 RIOK2Q9BVS4 552 aaKnown RBP8.39□□□□□ -1.07
TROAP-208ENST00000548817 POLR1EQ9GZS1 481 aaKnown RBP8.39□□□□□ -1.07
TROAP-208ENST00000548817 EPB41L1Q9H4G0 881 aa8.39□□□□□ -1.07
TROAP-208ENST00000548817 HAUS4Q9H6D7 363 aa8.39□□□□□ -1.07
TROAP-208ENST00000548817 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.39□□□□□ -1.07
TROAP-208ENST00000548817 TTLL3Q9Y4R7 772 aa8.39□□□□□ -1.07
TROAP-208ENST00000548817 PCDHGA6Q9Y5G7 932 aa8.39□□□□□ -1.07
TROAP-208ENST00000548817 A0A0J9YYE9 177 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 CDC14CA4D256 554 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 A6NCN8 305 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 ANKUB1A6NFN9 424 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 OR5K4A6NMS3 321 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 SMTNL1A8MU46 457 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 POLR1CO15160 346 aaPredicted RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 SNX2O60749 519 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 TRBC1P01850 177 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 FURINP09958 794 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 F8A1P23610 371 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 CSF2RBP32927 897 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 FASLGP48023 281 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 ZNF165P49910 485 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 HHEXQ03014 270 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 NFATC2Q13469 925 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 ZRSR2Q15696 482 aaKnown RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 CHRNA6Q15825 494 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 HADHQ16836 314 aaKnown RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 TIGD7Q6NT04 549 aaPredicted RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 ZNF571Q7Z3V5 609 aaPredicted RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 TRIM74Q86UV6 250 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 ZNF761Q86XN6 746 aaPredicted RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 PLXDC1Q8IUK5 500 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 RAVER1Q8IY67 606 aaKnown RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 PGBD5Q8N414 524 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 SFRP1Q8N474 314 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.38□□□□□ -1.07
TROAP-208ENST00000548817 Q8NA96 180 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 SLC37A2Q8TED4 501 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 PTCD2Q8WV60 388 aaKnown RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 TEKT4Q8WW24 435 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 PIH1D2Q8WWB5 315 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 SCAMP4Q969E2 229 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 NSMCE3Q96MG7 304 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 CSPG4P5Q96PW8 444 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 CTRCQ99895 268 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 HERPUD2Q9BSE4 406 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 TRIM7Q9C029 511 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 RMI1Q9H9A7 625 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 SARS2Q9NP81 518 aaKnown RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 LATS2Q9NRM7 1088 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 LMBRD1Q9NUN5 540 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 ETNK2Q9NVF9 386 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 PKD2L2Q9NZM6 624 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 AIPL1Q9NZN9 384 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 TMEM9Q9P0T7 183 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 VPS18Q9P253 973 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 MAP10Q9P2G4 905 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 RCOR3Q9P2K3 495 aaPredicted RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 KLHL3Q9UH77 587 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 IP6K2Q9UHH9 426 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 G3BP2Q9UN86 482 aaKnown RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 PPIL1Q9Y3C6 166 aa8.38□□□□□ -1.07
TROAP-208ENST00000548817 MRPS18BQ9Y676 258 aaKnown RBP8.38□□□□□ -1.07
TROAP-208ENST00000548817 CROCCQ5TZA2 2017 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 KIR2DS5A0A0G2JLQ3 304 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 A0A0G2JNG1 304 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 KIR2DS3K7RE56 304 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 CREG1O75629 220 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 FAM155BO75949 473 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 DNAJB5O75953 348 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 PEX11BO96011 259 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 PDHA1P08559 390 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 RARAP10276 462 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 HOXB4P17483 251 aaPredicted RBP8.37□□□□□ -1.07
TROAP-208ENST00000548817 IL1R2P27930 398 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 STC1P52823 247 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 EPHA4P54764 986 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 RPL26P61254 145 aaKnown RBP8.37□□□□□ -1.07
TROAP-208ENST00000548817 PTSQ03393 145 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 FOXM1Q08050 763 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 KIR2DS5Q14953 304 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 IFI16Q16666 785 aaKnown RBP8.37□□□□□ -1.07
TROAP-208ENST00000548817 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.37□□□□□ -1.07
TROAP-208ENST00000548817 ZFYVE27Q5T4F4 411 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 SLC6A19Q695T7 634 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 IYDQ6PHW0 289 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 RBM43Q6ZSC3 357 aaKnown RBP8.37□□□□□ -1.07
TROAP-208ENST00000548817 RFLNAQ6ZTI6 216 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 ARHGAP22Q7Z5H3 698 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 PHYKPLQ8IUZ5 450 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 MAP7D3Q8IWC1 876 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 TRIM48Q8IWZ4 208 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 RHOT1Q8IXI2 618 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 IQCKQ8N0W5 287 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 AOPEPQ8N6M6 819 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 KCTD6Q8NC69 237 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 LPCAT1Q8NF37 534 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms