RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 E5RI56 91 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 TXNDC9O14530 226 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 SMAD6O43541 496 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 CRCPO75575 148 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 ESR1P03372 595 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 CAPNS1P04632 268 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 SPATA31D3P0C874 917 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 HMGCLP35914 325 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 CLCN7P51798 805 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 SLC7A2P52569 658 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 RPL26P61254 145 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 TRAP1Q12931 704 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 ARHGEF6Q15052 776 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 TRIM60Q495X7 471 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 AARS2Q5JTZ9 985 aaKnown RBP18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 TXNDC11Q6PKC3 985 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 SPATA31D4Q6ZUB0 917 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 TCEAL8Q8IYN2 117 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 NAT14Q8WUY8 206 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 PIH1D2Q8WWB5 315 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 TOP1MTQ969P6 601 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 ROPN1LQ96C74 230 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 ZNF689Q96CS4 500 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 PLEKHG4BQ96PX9 1271 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 HGH1Q9BTY7 390 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 MAGEE1Q9HCI5 957 aa18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 SDR39U1Q9NRG7 319 aaPredicted RBP18.36■□□□□ 0.53
PRPF40B-208ENST00000548436 BBIP1A8MTZ0 92 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 KIF1CO43896 1103 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 PGLSO95336 258 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 ESRRBO95718 433 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 OLFM2O95897 454 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 PIM1P11309 404 aaPredicted RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 CA5AP35218 305 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 DIO3P55073 304 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 CACNG1Q06432 222 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 TLR1Q15399 786 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 SAMD4BQ5PRF9 694 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 ARMC12Q5T9G4 340 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 CNKSR3Q6P9H4 555 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 MFN1Q8IWA4 741 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 DCAF4L2Q8NA75 395 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 PCYOX1LQ8NBM8 494 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 ADCY4Q8NFM4 1077 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 MYO19Q96H55 970 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 GPATCH1Q9BRR8 931 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 IL1RL2Q9HB29 575 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 CD274Q9NZQ7 290 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 KIAA1671Q9BY89 1806 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 ZNF106Q9H2Y7 1883 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 PIKFYVEQ9Y2I7 2098 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 MKI67P46013 3256 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 TYW5A2RUC4 315 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 E2F3O00716 465 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 MATN4O95460 622 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 URODP06132 367 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 PRR35P0CG20 571 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 RHDQ02161 417 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 PDK3Q15120 406 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 RBBP7Q16576 425 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 CYP2R1Q6VVX0 501 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 SLCO4A1Q96BD0 722 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 SLC52A3Q9NQ40 469 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 SPATS2LQ9NUQ6 558 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 EIF2B4Q9UI10 523 aaKnown RBP18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 GPR45Q9Y5Y3 372 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 COMMD10Q9Y6G5 202 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 SLC30A1Q9Y6M5 507 aa18.35■□□□□ 0.53
PRPF40B-208ENST00000548436 LAMA2P24043 3122 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 LTBP2Q14767 1821 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 SNX2O60749 519 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 MLYCDO95822 493 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 UROSP10746 265 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 GKP32189 559 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 TGFBIQ15582 683 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 SCIMPQ6UWF3 145 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 FAM217AQ8IXS0 508 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 EVLQ9UI08 416 aaPredicted RBP18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 TSR3Q9UJK0 312 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 CLEC4EQ9ULY5 219 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 NDUFAF1Q9Y375 327 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 DHRS7Q9Y394 339 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 AP4S1Q9Y587 144 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 TCRBV3S1A0A5B6 114 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 GAPDHSO14556 408 aaPredicted RBP18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 DENRO43583 198 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 VPS4BO75351 444 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 IDO1P14902 403 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 NAA20P61599 178 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 AP1S1P61966 158 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 YBX1P67809 324 aaKnown RBP18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 CYP4F8P98187 520 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 GRM2Q14416 872 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 XKR7Q5GH72 579 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 OGFOD2Q6N063 350 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 UGT2A3Q6UWM9 527 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 FAM151BQ6UXP7 276 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 STK40Q8N2I9 435 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 CATSPER1Q8NEC5 780 aa18.34■□□□□ 0.53
PRPF40B-208ENST00000548436 ACOX2Q99424 681 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms