RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 UBA1P22314 1058 aaKnown RBP4.11□□□□□ -1.75
PTCH1-216ENST00000548379 HOXD3P31249 432 aaPredicted RBP4.11□□□□□ -1.75
PTCH1-216ENST00000548379 MRPL12P52815 198 aaKnown RBP4.11□□□□□ -1.75
PTCH1-216ENST00000548379 MFAP4P55083 255 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 SPOCK1Q08629 439 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 GRIK2Q13002 908 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 NTRK2Q16620 822 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 ZSCAN23Q3MJ62 389 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 SIGIRRQ6IA17 410 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 LCN10Q6JVE6 187 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 TAOK1Q7L7X3 1001 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 PRR26Q8N8Z3 221 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 ZNF48Q96MX3 618 aaPredicted RBP4.11□□□□□ -1.75
PTCH1-216ENST00000548379 SLF1Q9BQI6 1058 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 PCGF1Q9BSM1 259 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 MMTAG2Q9BU76 263 aaKnown RBP4.11□□□□□ -1.75
PTCH1-216ENST00000548379 DCLK3Q9C098 648 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 SLC9A2Q9UBY0 812 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 TINAGQ9UJW2 476 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 FZD10Q9ULW2 581 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 XIRP1Q702N8 1843 aaKnown RBP4.11□□□□□ -1.75
PTCH1-216ENST00000548379 SBNO1A3KN83 1393 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 EIF3AQ14152 1382 aaKnown RBP4.11□□□□□ -1.75
PTCH1-216ENST00000548379 DHX57Q6P158 1386 aaKnown RBP4.11□□□□□ -1.75
PTCH1-216ENST00000548379 TNS3Q68CZ2 1445 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 PRAG1Q86YV5 1406 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 SLIT2O94813 1529 aa4.11□□□□□ -1.75
PTCH1-216ENST00000548379 PCSK5Q92824 1860 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 GLOD5A6NK44 160 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 OR6C75A6NL08 312 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 B4DGG1 531 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 SMAD9O15198 467 aaKnown RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 P4HA2O15460 535 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 OGG1O15527 345 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 NDUFS7O75251 213 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 HIST1H2ABP04908 130 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 ICAM1P05362 532 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 G6PDP11413 515 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 HIST1H2ADP20671 130 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 ARRB2P32121 409 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PRCPP42785 496 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 FASLGP48023 281 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 NRIP1P48552 1158 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 ZNF81P51508 661 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 GPR143P51810 404 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PGGT1BP53609 377 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PNLIPRP2P54317 469 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 SREBF2Q12772 1141 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 ZNF805Q5CZA5 627 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 GARNL3Q5VVW2 1013 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 KRT79Q5XKE5 535 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 TMEM198Q66K66 360 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 C8orf82Q6P1X6 216 aaPredicted RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 CRELD2Q6UXH1 353 aaPredicted RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 HIST3H2AQ7L7L0 130 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 ZC3HC1Q86WB0 502 aaKnown RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 NRROSQ86YC3 692 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 LINC00346Q8IVM7 164 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 CHERPQ8IWX8 916 aaKnown RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 MCEMP1Q8IX19 187 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 BEST3Q8N1M1 668 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PELI3Q8N2H9 469 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 WFIKKN2Q8TEU8 576 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PRPF31Q8WWY3 499 aaKnown RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 JAKMIP2Q96AA8 810 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 SAT2Q96F10 170 aaPredicted RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 HMCESQ96FZ2 354 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 CAMK1GQ96NX5 476 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PRAM1Q96QH2 718 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 FAM234AQ9H0X4 552 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 RBM38Q9H0Z9 239 aaKnown RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 EBF3Q9H4W6 596 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 C17orf75Q9HAS0 396 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 CNGB3Q9NQW8 809 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 ACSS1Q9NUB1 689 aaPredicted RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PAG1Q9NWQ8 432 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 MARCH4Q9P2E8 410 aaPredicted RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 COPG2Q9UBF2 871 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 CHORDC1Q9UHD1 332 aaPredicted RBP4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PTGDR2Q9Y5Y4 395 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 SQORQ9Y6N5 450 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 PXDNQ92626 1479 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 GCC2Q8IWJ2 1684 aa4.1□□□□□ -1.75
PTCH1-216ENST00000548379 XRN1Q8IZH2 1706 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 CHD2O14647 1828 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 CTDSP2O14595 271 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 MAP2K7O14733 419 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 ADAMDEC1O15204 470 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 TRIM21P19474 475 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 ANXA7P20073 488 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 LMO1P25800 156 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 RPL3P39023 403 aaKnown RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 MMP14P50281 582 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 PLCD1P51178 756 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 CXCL9Q07325 125 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 LRMPQ12912 555 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 BAATQ14032 418 aaPredicted RBP4.09□□□□□ -1.75
PTCH1-216ENST00000548379 DECR1Q16698 335 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 PNLIPRP3Q17RR3 467 aa4.09□□□□□ -1.75
PTCH1-216ENST00000548379 TDRD12Q587J7 1177 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms