RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 OR14J1Q9UGF5 321 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 CAMK2AQ9UQM7 478 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 KCNK7Q9Y2U2 307 aa3.84□□□□□ -1.79
CCDC38-204ENST00000546816 KRTAP16-1A8MUX0 517 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 CIDEAO60543 219 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 NKX2-2O95096 273 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 CD48P09326 243 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 PRSS56P0CW18 603 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 CSF2RAP15509 400 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 GNB3P16520 340 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 CHRNB4P30926 498 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 MAPK9P45984 424 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 BIRC3Q13489 604 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 PLXDC2Q6UX71 529 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 Q75L30 129 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 LYG1Q8N1E2 194 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 MMABQ96EY8 250 aaPredicted RBP3.83□□□□□ -1.8
CCDC38-204ENST00000546816 LRR1Q96L50 414 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 HARBI1Q96MB7 349 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 AGXT2Q9BYV1 514 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 PAIP1Q9H074 479 aaKnown RBP3.83□□□□□ -1.8
CCDC38-204ENST00000546816 SCPEP1Q9HB40 452 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 SLC52A3Q9NQ40 469 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 WASH6PQ9NQA3 447 aa3.83□□□□□ -1.8
CCDC38-204ENST00000546816 A0A1W2PPI3 338 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 HHLA1C9JL84 531 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 NR5A2O00482 541 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 PAGE4O60829 102 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 ZNF10P21506 573 aaPredicted RBP3.82□□□□□ -1.8
CCDC38-204ENST00000546816 HOXC8P31273 242 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 DCTN2Q13561 401 aaKnown RBP3.82□□□□□ -1.8
CCDC38-204ENST00000546816 ACVR2BQ13705 512 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 KIR2DS3Q14952 304 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 ZC2HC1CQ53FD0 456 aaPredicted RBP3.82□□□□□ -1.8
CCDC38-204ENST00000546816 RAB6CQ53S08 254 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 NSUN5P2Q63ZY6 315 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 RBMS3Q6XE24 437 aaKnown RBP3.82□□□□□ -1.8
CCDC38-204ENST00000546816 ESX1Q8N693 406 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 ZNF248Q8NDW4 579 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 DNAAF4Q8WXU2 420 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 SENP5Q96HI0 755 aaPredicted RBP3.82□□□□□ -1.8
CCDC38-204ENST00000546816 ABHD8Q96I13 439 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 STRA6Q9BX79 667 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 RAB6CQ9H0N0 254 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 SLC13A4Q9UKG4 626 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 ACAD8Q9UKU7 415 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 LRRFIP2Q9Y608 721 aaKnown RBP3.82□□□□□ -1.8
CCDC38-204ENST00000546816 CLIC4Q9Y696 253 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 PRSS21Q9Y6M0 314 aa3.82□□□□□ -1.8
CCDC38-204ENST00000546816 A0A0G2JNG1 304 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 TMEM178BH3BS89 294 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 JRKO75564 520 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 PDE9AO76083 593 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 KCNK5O95279 499 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 TSHBP01222 138 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 UBL4AP11441 157 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 HARS2P49590 506 aaKnown RBP3.81□□□□□ -1.8
CCDC38-204ENST00000546816 DRG2P55039 364 aaKnown RBP3.81□□□□□ -1.8
CCDC38-204ENST00000546816 CDC16Q13042 620 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 DHX8Q14562 1220 aaKnown RBP3.81□□□□□ -1.8
CCDC38-204ENST00000546816 KIR2DS5Q14953 304 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 GSTA5Q7RTV2 222 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 GTSCR1Q86UQ5 136 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 HEATR4Q86WZ0 1026 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 SPAG16Q8N0X2 631 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 UTP15Q8TED0 518 aaKnown RBP3.81□□□□□ -1.8
CCDC38-204ENST00000546816 PIP5K1AQ99755 562 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 RANBP17Q9H2T7 1088 aaKnown RBP3.81□□□□□ -1.8
CCDC38-204ENST00000546816 MAGIXQ9H6Y5 334 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 COPG2Q9UBF2 871 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 ARHGAP26Q9UNA1 814 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 C2CD2Q9Y426 696 aa3.81□□□□□ -1.8
CCDC38-204ENST00000546816 A0A087X002 238 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 A0A1W2PQF6 199 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 A0A1W2PRG0 241 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 NPIPB15A6NHN6 443 aaPredicted RBP3.8□□□□□ -1.8
CCDC38-204ENST00000546816 EIF3CLB5ME19 914 aaKnown RBP3.8□□□□□ -1.8
CCDC38-204ENST00000546816 XBP1P17861 261 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ELF1P32519 619 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 NR2C2P49116 596 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 PPM1FP49593 454 aaPredicted RBP3.8□□□□□ -1.8
CCDC38-204ENST00000546816 F2RL1P55085 397 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 MLLT10P55197 1068 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 MBTD1Q05BQ5 628 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 TMEM115Q12893 351 aaPredicted RBP3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ACAD10Q6JQN1 1059 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 SUSD1Q6UWL2 747 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ZNF354CQ86Y25 554 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ARMC8Q8IUR7 673 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 CNTROBQ8N137 903 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 OR1J2Q8NGS2 313 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 SMC6Q96SB8 1091 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ATOH8Q96SQ7 321 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ASCL2Q99929 193 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 TRPC7Q9HCX4 862 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 ADPRHL2Q9NX46 363 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 TAS2R10Q9NYW0 307 aa3.8□□□□□ -1.8
CCDC38-204ENST00000546816 DLGAP2Q9P1A6 1054 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms