RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 IL5RAQ01344 420 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 CCDC142Q17RM4 750 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 GPR33Q49SQ1 333 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 BRAT1Q6PJG6 821 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 TMEM26Q6ZUK4 368 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 SRFBP1Q8NEF9 429 aaKnown RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 ZNF180Q9UJW8 692 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 ZNF490Q9ULM2 529 aaPredicted RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 RBM47A0AV96 593 aaKnown RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 FOXO6A8MYZ6 492 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 TK2O00142 265 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 COCHO43405 550 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 RFPL2O75678 378 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 BEST1O76090 585 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 COX4I1P13073 169 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 OGNP20774 298 aaKnown RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 ALAS2P22557 587 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 BMPR1AP36894 532 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 PITX1P78337 314 aaPredicted RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 TEAD4Q15561 434 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 LYSMD3Q7Z3D4 306 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 ADCK1Q86TW2 530 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 CLHC1Q8NHS4 586 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 PPCDCQ96CD2 204 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 PIWIL1Q96J94 861 aaKnown RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 TRIT1Q9H3H1 467 aaKnown RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 NOL11Q9H8H0 719 aaKnown RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 PDLIM7Q9NR12 457 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 GRHL1Q9NZI5 618 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 ZNF780BQ9Y6R6 833 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 MYH3P11055 1940 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 NRAPQ86VF7 1730 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 PIPSLA2A3N6 862 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 RHPN2P1A8MT19 583 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 ANKRD66B4E2M5 251 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 HOXB2P14652 356 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 IDO1P14902 403 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 MANFP55145 182 aaKnown RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 CHIT1Q13231 466 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 C9orf64Q5T6V5 341 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 DCAF4L2Q8NA75 395 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 SHDQ96IW2 340 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 SLC38A3Q99624 504 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 CCDC177Q9NQR7 707 aaPredicted RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
CHERP-203ENST00000546361 MTF2Q9Y483 593 aaPredicted RBP11.75□□□□□ -0.53
CHERP-203ENST00000546361 CITO14578 2027 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 PLIN3O60664 434 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 MTX2O75431 263 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 OR6A2O95222 327 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 DLDP09622 509 aaKnown RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 S100A5P33763 92 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 SLC25A11Q02978 314 aaKnown RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 ITPRIPL2Q3MIP1 535 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 GATAD2AQ86YP4 633 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 ZC3H3Q8IXZ2 948 aaKnown RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 FSTL5Q8N475 847 aaPredicted RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 OR6Y1Q8NGX8 325 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 TTLL2Q9BWV7 592 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 GATA5Q9BWX5 397 aaPredicted RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 DZANK1Q9NVP4 752 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 KCNA5P22460 613 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 SERINC3Q13530 473 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 ACAP2Q15057 778 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 MYLK3Q32MK0 819 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 PLEKHG6Q3KR16 790 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 LSM12Q3MHD2 195 aaKnown RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 LDLRAP1Q5SW96 308 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 B3GNT9Q6UX72 402 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 IZUMO2Q6UXV1 221 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 SNX20Q7Z614 316 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 RPAINQ86UA6 219 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 MPP5Q8N3R9 675 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 ZNF784Q8NCA9 323 aaPredicted RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 KLHL4Q9C0H6 718 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 CDH19Q9H159 772 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 RSPH9Q9H1X1 276 aaPredicted RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 MMADHCQ9H3L0 296 aaPredicted RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 WDR26Q9H7D7 661 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 REEP1Q9H902 201 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 CARS2Q9HA77 564 aaKnown RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 KLHL20Q9Y2M5 609 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 GABRDO14764 452 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 SLC22A3O75751 556 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 SMNDC1O75940 238 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHERP-203ENST00000546361 CCNDBP1O95273 360 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 CLDN9O95484 217 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 KRT75O95678 551 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 ZCCHC18P0CG32 403 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 HLA-EP13747 358 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 GRIA3P42263 894 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 BIKQ13323 160 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 ZNF460Q14592 562 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 GPAT3Q53EU6 434 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 ENPP7Q6UWV6 458 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 C14orf80Q86SX3 495 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 RCN3Q96D15 328 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 C12orf66Q96MD2 445 aa11.74□□□□□ -0.53
CHERP-203ENST00000546361 RIOK2Q9BVS4 552 aaKnown RBP11.74□□□□□ -0.53
CHERP-203ENST00000546361 CLOCKO15516 846 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms