RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MAN2B1O00754 1011 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 FBP2O00757 339 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 UBDO15205 165 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 WDR47O94967 919 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 GOT1P17174 413 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 CDK16Q00536 496 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 POU5F1Q01860 360 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 GNA12Q03113 381 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ENPEPQ07075 957 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 PARP15Q460N3 678 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 GRTP1Q5TC63 336 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 R3HCC1LQ7Z5L2 792 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 FGD2Q7Z6J4 655 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 UBE2Q1Q7Z7E8 422 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 MMAAQ8IVH4 418 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 LINC01465Q8N7H1 131 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ATG16L2Q8NAA4 619 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ST13P5Q8NFI4 369 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 FBXL12Q9NXK8 326 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 PCDHGC3Q9UN70 934 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 H3BQ06 376 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 M0R3G1 203 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 TBX10O75333 385 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 GALTP07902 379 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ADH5P11766 374 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 CLK1P49759 484 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 DUSP3P51452 185 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 VAC14Q08AM6 782 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 GRM2Q14416 872 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 UPP1Q16831 310 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 AGKQ53H12 422 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 CLLU1OSQ5K130 101 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 MLIPQ5VWP3 458 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 TXNDC8Q6A555 127 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 LPCAT2Q7L5N7 544 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 C2orf73Q8N5S3 287 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 CLP1Q92989 425 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 SUSD3Q96L08 255 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 AIF1LQ9BQI0 150 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 NUSAP1Q9BXS6 441 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 SLC4A5Q9BY07 1137 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 CARS2Q9HA77 564 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 CRTAC1Q9NQ79 661 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 DDX28Q9NUL7 540 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 FBXW2Q9UKT8 454 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 B4DGG1 531 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PDLIM1O00151 329 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PRMT5O14744 637 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 TM9SF1O15321 606 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PHGDHO43175 533 aaKnown RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 ALBP02768 609 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 ALADP13716 330 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PORP16435 677 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 EPORP19235 508 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 MC4RP32245 332 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 DEFB103AP81534 67 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PRKG2Q13237 762 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PFKFB4Q16877 469 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 CAPN13Q6MZZ7 669 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 CLEC20AQ6ZU45 233 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 DEFB119Q8N690 84 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 C3orf58Q8NDZ4 430 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 OR7D4Q8NG98 312 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 ACTRT1Q8TDG2 376 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 OMA1Q96E52 524 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 RBM18Q96H35 190 aaKnown RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 NSL1Q96IY1 281 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 KLHL32Q96NJ5 620 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 STRADBQ9C0K7 418 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 SLC32A1Q9H598 525 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 FANCFQ9NPI8 374 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 HEY2Q9UBP5 337 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 FADS3Q9Y5Q0 445 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 CITO14578 2027 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 GLYATL1P3A0A0U1RQE8 302 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 TRIM13O60858 407 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 ULK1O75385 1050 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 NAT2P11245 290 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 RHOQP17081 205 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 FECHP22830 423 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 ADRA1DP25100 572 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 PSMA4P25789 261 aaKnown RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 FEN1P39748 380 aaKnown RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 LRRC26Q2I0M4 334 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 LRMDAQ9H2I8 198 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 SRMSQ9H3Y6 488 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 POLR1BQ9H9Y6 1135 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 MAPRE3Q9UPY8 281 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 RAI2Q9Y5P3 530 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 VSTM5A8MXK1 200 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 LRCH4O75427 683 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 TRMUO75648 421 aaKnown RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 MATN4O95460 622 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 LRPAP1P30533 357 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 SERPINB5P36952 375 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 IFNGR2P38484 337 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 RPL5P46777 297 aaKnown RBP8.54□□□□□ -1.04
CLIP1-218ENST00000545889 KCNJ5P48544 419 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 CDH4P55283 916 aa8.54□□□□□ -1.04
CLIP1-218ENST00000545889 CREB5Q02930 508 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms