RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 LPOP22079 712 aaPredicted RBP9.25□□□□□ -0.93
CHD4-212ENST00000545083 CAPZBP47756 277 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 STC1P52823 247 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 AIF1P55008 147 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 RPS15P62841 145 aaKnown RBP9.25□□□□□ -0.93
CHD4-212ENST00000545083 TUBB3Q13509 450 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 RAPSNQ13702 412 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 ZNF235Q14590 738 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 IHHQ14623 411 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 VWA3BQ502W6 1294 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 ARMC12Q5T9G4 340 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 LCN10Q6JVE6 187 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 RFX8Q6ZV50 586 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 USP45Q70EL2 814 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 ZNF765Q7L2R6 523 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 MCEMP1Q8IX19 187 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 INPP5DQ92835 1189 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 PEBP4Q96S96 227 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 SMAD5Q99717 465 aaKnown RBP9.25□□□□□ -0.93
CHD4-212ENST00000545083 MGME1Q9BQP7 344 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 VPS16Q9H269 839 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 DHX35Q9H5Z1 703 aaKnown RBP9.25□□□□□ -0.93
CHD4-212ENST00000545083 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 NTNG1Q9Y2I2 539 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 SIK3Q9Y2K2 1263 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 TACC2O95359 2948 aa9.25□□□□□ -0.93
CHD4-212ENST00000545083 IGHV5-51A0A0C4DH38 117 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 SSU72P8A0A1W2PR75 194 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 TMEM63AO94886 807 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 VIPP01282 170 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 EBLN1P0CF75 366 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 CDK18Q07002 472 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 GPS2Q13227 327 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 NAA30Q147X3 362 aaPredicted RBP9.24□□□□□ -0.93
CHD4-212ENST00000545083 CLEC16AQ2KHT3 1053 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 HSP90AA4PQ58FG1 418 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 CRB2Q5IJ48 1285 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 PPP1R15BQ5SWA1 713 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 ZNF648Q5T619 568 aaPredicted RBP9.24□□□□□ -0.93
CHD4-212ENST00000545083 SP5Q6BEB4 398 aaPredicted RBP9.24□□□□□ -0.93
CHD4-212ENST00000545083 IRGCQ6NXR0 463 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 ZNF517Q6ZMY9 492 aaPredicted RBP9.24□□□□□ -0.93
CHD4-212ENST00000545083 MON1BQ7L1V2 547 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 PHF13Q86YI8 300 aaPredicted RBP9.24□□□□□ -0.93
CHD4-212ENST00000545083 IQCKQ8N0W5 287 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 ARFGAP1Q8N6T3 406 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 GLIS1Q8NBF1 620 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 SLC38A9Q8NBW4 561 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 SLC41A2Q96JW4 573 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 ZNF599Q96NL3 588 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 CNPY3Q9BT09 278 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 SNRNP25Q9BV90 132 aaKnown RBP9.24□□□□□ -0.93
CHD4-212ENST00000545083 CHST8Q9H2A9 424 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 GANQ9H2C0 597 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 OSGEPL1Q9H4B0 414 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 PDE7BQ9NP56 450 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 ARFGAP3Q9NP61 516 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 KLC4Q9NSK0 619 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 ETNK2Q9NVF9 386 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 GPR83Q9NYM4 423 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 SEMA5BQ9P283 1151 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 SLC23A2Q9UGH3 650 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 RARRES3Q9UL19 164 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 ADGRG1Q9Y653 693 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 DNHD1Q96M86 4753 aa9.24□□□□□ -0.93
CHD4-212ENST00000545083 A0A0J9YYE9 177 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 F5H423 210 aaPredicted RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 DAPK3O43293 454 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 GRID2O43424 1007 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 NUAK1O60285 661 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 MAFKO60675 156 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 CLDN7O95471 211 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 TRBC1P01850 177 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 CALB1P05937 261 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 PYGLP06737 847 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 BRAFP15056 766 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 ZNF8P17098 575 aaPredicted RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 HSPA9P38646 679 aaKnown RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 NSFP46459 744 aaKnown RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 KLK7P49862 253 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 CLCNKAP51800 687 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 GPR18Q14330 331 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 ZRSR2Q15696 482 aaKnown RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 SEPT7Q16181 437 aaKnown RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 PRAMEF17Q5VTA0 474 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 DNAJC24Q6P3W2 148 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 TRIM72Q6ZMU5 477 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 CYP4V2Q6ZWL3 525 aaPredicted RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 HPS6Q86YV9 775 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 PHYKPLQ8IUZ5 450 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 TRIM48Q8IWZ4 208 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 AOPEPQ8N6M6 819 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 ENDOVQ8N8Q3 282 aaKnown RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 AVL9Q8NBF6 648 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 SIDT2Q8NBJ9 832 aaKnown RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 MR1Q95460 341 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 FCRL4Q96PJ5 515 aa9.23□□□□□ -0.93
CHD4-212ENST00000545083 BARD1Q99728 777 aaKnown RBP9.23□□□□□ -0.93
CHD4-212ENST00000545083 TUBGCP2Q9BSJ2 902 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms