RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 RXRGP48443 463 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 SNRPD1P62314 119 aaKnown RBP5.75□□□□□ -1.49
VPS50-220ENST00000544910 SP3Q02447 781 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 ITGADQ13349 1161 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 GTF2H2Q13888 395 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 BOP1Q14137 746 aaKnown RBP5.75□□□□□ -1.49
VPS50-220ENST00000544910 PABPC1LQ4VXU2 614 aaKnown RBP5.75□□□□□ -1.49
VPS50-220ENST00000544910 SFT2D3Q587I9 215 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 GTF2H2CQ6P1K8 395 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 TBC1D21Q8IYX1 336 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 OR8H2Q8N162 312 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 LINC01465Q8N7H1 131 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 FAM156AQ8NDB6 213 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 OR7D4Q8NG98 312 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 FBXO30Q8TB52 745 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 GANCQ8TET4 914 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 CAPSLQ8WWF8 208 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 ARNTL2Q8WYA1 636 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 NELL1Q92832 810 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 REPS1Q96D71 796 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 DCUN1D5Q9BTE7 237 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 KLHL3Q9UH77 587 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 EMCNQ9ULC0 261 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 TRAV19A0A0A6YYK7 116 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 NT5C1B-RDH14C9J2C7 533 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 G3V2L1 256 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 PTGESO14684 152 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 FFAR3O14843 346 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 GPR42O15529 346 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 RGS5O15539 181 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 XRCC1P18887 633 aaPredicted RBP5.75□□□□□ -1.49
VPS50-220ENST00000544910 SLC26A3P40879 764 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 MAGEA3P43357 314 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 IL5RAQ01344 420 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 UBE3AQ05086 875 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 CBX3Q13185 183 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 PRKG2Q13237 762 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 DDX39BQ13838 428 aaKnown RBP5.75□□□□□ -1.49
VPS50-220ENST00000544910 ZNF846Q147U1 533 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 NR1D2Q14995 579 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 FBXL22Q6P050 247 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 TPGS1Q6ZTW0 290 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 ZNF534Q76KX8 674 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 RASAL3Q86YV0 1011 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 ADHFE1Q8IWW8 467 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 TP53INP2Q8IXH6 220 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 GALNT15Q8N3T1 639 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 SETD9Q8NE22 299 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 MCOLN3Q8TDD5 553 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 GIPC3Q8TF64 312 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 PHF21AQ96BD5 680 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 WDR83Q9BRX9 315 aaKnown RBP5.75□□□□□ -1.49
VPS50-220ENST00000544910 R3HDMLQ9H3Y0 253 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 ALG2Q9H553 416 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 POPDC3Q9HBV1 291 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 TMA7Q9Y2S6 64 aaKnown RBP5.75□□□□□ -1.49
VPS50-220ENST00000544910 TIMM22Q9Y584 194 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 COL4A5P29400 1685 aa5.75□□□□□ -1.49
VPS50-220ENST00000544910 ZCWPW2A0A1B0GU75 182 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 NEMP2A6NFY4 417 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 MGAT4DA6NG13 374 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 LSM1O15116 133 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 ZSCAN9O15535 394 aaPredicted RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 KERAO60938 352 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 FAM20BO75063 409 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 UMPSP11172 480 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 HPCAL1P37235 193 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 IRF5Q13568 498 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 LPIN1Q14693 890 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 SPANXN2Q5MJ10 180 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ZNF678Q5SXM1 525 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 DNAJC14Q6Y2X3 702 aaPredicted RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 DET1Q7L5Y6 550 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 RRM2BQ7LG56 351 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 PIM3Q86V86 326 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 KRT73Q86Y46 540 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 NPAS4Q8IUM7 802 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 SYT12Q8IV01 421 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 OR13C4Q8NGS5 318 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ZNF558Q96NG5 402 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 YME1L1Q96TA2 773 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 CIB1Q99828 191 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TBCDQ9BTW9 1192 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 RAD18Q9NS91 495 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 MIOSQ9NXC5 875 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TPRKBQ9Y3C4 175 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 CARNS1A5YM72 827 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 MOXD2PA6NHM9 499 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 SLC35E2BP0CK96 405 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 LEPRP48357 1165 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 ATN1P54259 1190 aaPredicted RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 PFKPQ01813 784 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 LIPEQ05469 1076 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TRAF3Q13114 568 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 IKBKEQ14164 716 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 TRIM71Q2Q1W2 868 aaKnown RBP5.74□□□□□ -1.49
VPS50-220ENST00000544910 PM20D1Q6GTS8 502 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 ERAP2Q6P179 960 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 CCDC149Q6ZUS6 474 aa5.74□□□□□ -1.49
VPS50-220ENST00000544910 C14orf80Q86SX3 495 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms