RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ZFYVE1Q9HBF4 777 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 MAGEE1Q9HCI5 957 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 RAD18Q9NS91 495 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 ZNHIT2Q9UHR6 403 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 ST14Q9Y5Y6 855 aa16.05■□□□□ 0.16
DDX55-212ENST00000544738 A1L4Q6 167 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 PRR19A6NJB7 356 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 ATP1A1P05023 1023 aaKnown RBP16.04■□□□□ 0.16
DDX55-212ENST00000544738 TNNT1P13805 278 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 UGT1A3P35503 534 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 MAGEA1P43355 309 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 NOP2P46087 812 aaKnown RBP16.04■□□□□ 0.16
DDX55-212ENST00000544738 DYNLT1P63172 113 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 CDK18Q07002 472 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 KLRB1Q12918 225 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 SQSTM1Q13501 440 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 LACTB2Q53H82 288 aaPredicted RBP16.04■□□□□ 0.16
DDX55-212ENST00000544738 TEX44Q53QW1 395 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 MFSD7Q6UXD7 560 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 NPNTQ6UXI9 565 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 PMEPA1Q969W9 287 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 WDR24Q96S15 920 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 LUC7LQ9NQ29 371 aaKnown RBP16.04■□□□□ 0.16
DDX55-212ENST00000544738 SDK2Q58EX2 2172 aa16.04■□□□□ 0.16
DDX55-212ENST00000544738 HGSO14964 777 aaPredicted RBP16.03■□□□□ 0.16
DDX55-212ENST00000544738 PPM1DO15297 605 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 PSTPIP1O43586 416 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 DNAJC6O75061 913 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 FGF3P11487 239 aaPredicted RBP16.03■□□□□ 0.16
DDX55-212ENST00000544738 SLC2A4P14672 509 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 CD1CP29017 333 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 CDKN2BP42772 138 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 UQCRFS1P47985 274 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 FASLGP48023 281 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 ARSDP51689 593 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 TRA2AQ13595 282 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX55-212ENST00000544738 GALNT3Q14435 633 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 DEFB109BQ30KR1 87 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 CHST15Q7LFX5 561 aaPredicted RBP16.03■□□□□ 0.16
DDX55-212ENST00000544738 LYSMD3Q7Z3D4 306 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 CCDC170Q8IYT3 715 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 TEX19Q8NA77 164 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 PATE1Q8WXA2 126 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 TADA1Q96BN2 335 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 TRIB3Q96RU7 358 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 ZSCAN5AQ9BUG6 496 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 CEP41Q9BYV8 373 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 GLOD4Q9HC38 313 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 CNOT6Q9ULM6 557 aaKnown RBP16.03■□□□□ 0.16
DDX55-212ENST00000544738 PLEKHM1Q9Y4G2 1056 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 ALG6Q9Y672 507 aa16.03■□□□□ 0.16
DDX55-212ENST00000544738 SPENQ96T58 3664 aaKnown RBP16.03■□□□□ 0.16
DDX55-212ENST00000544738 A0A0A6YYK5 440 aaPredicted RBP16.02■□□□□ 0.16
DDX55-212ENST00000544738 FADS2P1A8MWK0 482 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 DUX1O43812 170 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 CST8O60676 142 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 VPS4BO75351 444 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 LCA5LO95447 670 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 DCDC1P59894 354 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 GPLD1P80108 840 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 PCSK7Q16549 785 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 TAZQ16635 292 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 TFDP3Q5H9I0 405 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 PDPK2PQ6A1A2 396 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 KDELC2Q7Z4H8 507 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 TMC3Q7Z5M5 1100 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 SFRP1Q8N474 314 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 TC2NQ8N9U0 490 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 SSC4DQ8WTU2 575 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 TFB1MQ8WVM0 346 aaKnown RBP16.02■□□□□ 0.16
DDX55-212ENST00000544738 APOBEC4Q8WW27 367 aaKnown RBP16.02■□□□□ 0.16
DDX55-212ENST00000544738 P3H4Q92791 437 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 TEKT5Q96M29 485 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 SPATA16Q9BXB7 569 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 GPR63Q9BZJ6 419 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 CARD9Q9H257 536 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 STN1Q9H668 368 aaKnown RBP16.02■□□□□ 0.16
DDX55-212ENST00000544738 NFKBIL1Q9UBC1 381 aaPredicted RBP16.02■□□□□ 0.16
DDX55-212ENST00000544738 VPS4AQ9UN37 437 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.02■□□□□ 0.16
DDX55-212ENST00000544738 HYOU1Q9Y4L1 999 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 B3GALT1Q9Y5Z6 326 aa16.02■□□□□ 0.16
DDX55-212ENST00000544738 IGHV1OR21-1A0A087WYE8 117 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 GPR89AB7ZAQ6 455 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 CAPN5O15484 640 aaPredicted RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 NUAK1O60285 661 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 RAD1O60671 282 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 ZRANB2O95218 330 aaKnown RBP eCLIP16.01■□□□□ 0.15
DDX55-212ENST00000544738 SLC25A14O95258 325 aaPredicted RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 NDST3O95803 873 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 GPR89BP0CG08 455 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 NR1D1P20393 614 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 GNLYP22749 145 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 TNNT3P45378 269 aaPredicted RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 LIMK2P53671 638 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 SEPT6Q14141 434 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
DDX55-212ENST00000544738 SPA17Q15506 151 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 ZNF569Q5MCW4 686 aa16.01■□□□□ 0.15
DDX55-212ENST00000544738 ZNF787Q6DD87 383 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms