RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	ATP1A4	Q13733	1029 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	VWA3B	Q502W6	1294 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	MANEAL	Q5VSG8	457 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	ITPRIPL1	Q6GPH6	555 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	KIAA1324	Q6UXG2	1013 aa	Known RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	TMPRSS6	Q8IU80	811 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	CCDC83	Q8IWF9	413 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	BBS7	Q8IWZ6	715 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	KBTBD2	Q8IY47	623 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	SPART	Q8N0X7	666 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	CARF	Q8N187	725 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZCCHC9	Q8N567	271 aa	Known RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	C1orf131	Q8NDD1	294 aa	Known RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	PSD4	Q8NDX1	1056 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	CEP70	Q8NHQ1	597 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	ADAMTS17	Q8TE56	1095 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	RAD54L	Q92698	747 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	PRCC	Q92733	491 aa	Predicted RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	FGF11	Q92914	225 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	IGSF8	Q969P0	613 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	FBXO32	Q969P5	355 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	NXPE2	Q96DL1	559 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	STRA6	Q9BX79	667 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	TLR10	Q9BXR5	811 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	REXO4	Q9GZR2	422 aa	Known RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	ELOVL4	Q9GZR5	314 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	NACA2	Q9H009	215 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	MRPL44	Q9H9J2	332 aa	Known RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	IL21R	Q9HBE5	538 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	NOD2	Q9HC29	1040 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	INTS13	Q9NVM9	706 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	TMEM160	Q9NX00	188 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	ETAA1	Q9NY74	926 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	RBAK	Q9NYW8	714 aa	Predicted RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	IL37	Q9NZH6	218 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	THAP10	Q9P2Z0	257 aa	Predicted RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	SEL1L	Q9UBV2	794 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	EIF2B4	Q9UI10	523 aa	Known RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	LSM7	Q9UK45	103 aa	Known RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZNF510	Q9Y2H8	683 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	SLC27A6	Q9Y2P4	619 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	KIF3A	Q9Y496	699 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	OAS3	Q9Y6K5	1087 aa	Known RBP	6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	STON1	Q9Y6Q2	735 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	MYOF	Q9NZM1	2061 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	PLXND1	Q9Y4D7	1925 aa		6.27	□□□□□ -1.41
CPSF7-222	ENST00000544585	PCDH15	Q96QU1	1955 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ANKRD17	O75179	2603 aa	Known RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585		A0A1B0GVT2	93 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	FAM92A	A1XBS5	289 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	FAM149A	A5PLN7	773 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585		A6NCN8	305 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZNF233	A6NK53	670 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	DRGX	A6NNA5	263 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	NEDD8-MDP1	E9PL57	170 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585		J3KTA2	159 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	PLK4	O00444	970 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	TRIM24	O15164	1050 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZSCAN9	O15535	394 aa	Predicted RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	PAPSS1	O43252	624 aa	Predicted RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	HCRT	O43612	131 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	SRGAP2	O75044	1071 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	KRT38	O76015	456 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ZDHHC11B	P0C7U3	371 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	JUNB	P17275	347 aa	Predicted RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	GAP43	P17677	238 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ACTN2	P35609	894 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ATP5C1	P36542	298 aa	Known RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	CCT8	P50990	548 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	SEC24C	P53992	1094 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	NAP1L1	P55209	391 aa	Known RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	LOXL3	P58215	753 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	BNC1	Q01954	994 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ALCAM	Q13740	583 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ENPP2	Q13822	863 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	BOP1	Q14137	746 aa	Known RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	KIF19	Q2TAC6	998 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	BTBD16	Q32M84	506 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	FUT11	Q495W5	492 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	MDH1B	Q5I0G3	518 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	DHRS13	Q6UX07	377 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	RINL	Q6ZS11	566 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	TPGS1	Q6ZTW0	290 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	GPRIN1	Q7Z2K8	1008 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	SYCP3	Q8IZU3	236 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	GPD1L	Q8N335	351 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	RASSF8	Q8NHQ8	419 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ABHD5	Q8WTS1	349 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	CPT1B	Q92523	772 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	LARP4B	Q92615	738 aa	Known RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	ERP27	Q96DN0	273 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	TWSG1	Q9GZX9	223 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	NELFA	Q9H3P2	528 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	FBXO44	Q9H4M3	255 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	PDE11A	Q9HCR9	933 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	TLR8	Q9NR97	1041 aa	Known RBP	6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	AASS	Q9UDR5	926 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	SIX4	Q9UIU6	781 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	DAPP1	Q9UN19	280 aa		6.26	□□□□□ -1.41
CPSF7-222	ENST00000544585	C19orf53	Q9UNZ5	99 aa	Predicted RBP	6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms