RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CIDEBQ9UHD4 219 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 HCN2Q9UL51 889 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 PLA2G4CQ9UP65 541 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 APOBEC2Q9Y235 224 aaKnown RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 TBC1D3BA6NDS4 549 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 MATN2O00339 956 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 VPS26AO75436 327 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 TIMP2P16035 220 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 ACRV1P26436 265 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SERPINB5P36952 375 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SPAM1P38567 509 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SUOXP51687 545 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 ELF3P78545 371 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SULT2A1Q06520 285 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 UNC50Q53HI1 259 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 UGT3A1Q6NUS8 523 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 EPGNQ6UW88 154 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SERPINA13PQ6UXR4 307 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 MBOAT1Q6ZNC8 495 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 KIAA0907Q7Z7F0 614 aaPredicted RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 PPM1EQ8WY54 764 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 ISG20Q96AZ6 181 aaKnown RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 CLPTM1LQ96KA5 538 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 CCDC106Q9BWC9 280 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SPATA16Q9BXB7 569 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 CLPBQ9H078 707 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 SAR1AQ9NR31 198 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 IL36AQ9UHA7 158 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 DPP7Q9UHL4 492 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 FBXO10Q9UK96 956 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 ADAMTS6Q9UKP5 1117 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
HCFC2-202ENST00000544223 OAS3Q9Y6K5 1087 aaKnown RBP13.55□□□□□ -0.24
HCFC2-202ENST00000544223 CAPN14A8MX76 684 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 TMEM114B3SHH9 223 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 PRMT5O14744 637 aaPredicted RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 RBP1P09455 135 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 PSMA3P25788 255 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 PTGER3P43115 390 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 SH3BP2P78314 561 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 RAD51Q06609 339 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 LSM12Q3MHD2 195 aaKnown RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 ZNF678Q5SXM1 525 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 PDE12Q6L8Q7 609 aaKnown RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 SNX20Q7Z614 316 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 GPR149Q86SP6 731 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 LONP2Q86WA8 852 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 TRPC4APQ8TEL6 797 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 SREK1Q8WXA9 508 aaKnown RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 CATSPER2Q96P56 530 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 CDK15Q96Q40 435 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 GDF15Q99988 308 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 CPEB1Q9BZB8 566 aaKnown RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 CLEC1BQ9P126 229 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 C16orf96A6NNT2 1141 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 SLC9A3R1O14745 358 aaPredicted RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 ESRRAP11474 423 aaPredicted RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 EEF1DP29692 281 aaKnown RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 NNMTP40261 264 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 MAPK8P45983 427 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 ACSBG2Q5FVE4 666 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 RALGPS1Q5JS13 557 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 SEL1L3Q68CR1 1132 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 CYB5D1Q6P9G0 228 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 SCIMPQ6UWF3 145 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 PARS2Q7L3T8 475 aaKnown RBP13.54□□□□□ -0.24
HCFC2-202ENST00000544223 RTL10Q7L3V2 364 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 CUZD1Q86UP6 607 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 TRIM74Q86UV6 250 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 FOXJ1Q92949 421 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 TCF12Q99081 682 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 RASSF4Q9H2L5 321 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 ARHGEF3Q9NR81 526 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 TXLNGQ9NUQ3 528 aa13.54□□□□□ -0.24
HCFC2-202ENST00000544223 LRRK1Q38SD2 2015 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 INPP4BO15327 924 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 TBX10O75333 385 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 RASSF9O75901 435 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 SORBS2O94875 1100 aaKnown RBP13.53□□□□□ -0.24
HCFC2-202ENST00000544223 ITGALP20701 1170 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 SEC13P55735 322 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 ZNF234Q14588 700 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 NXPE1Q8N323 547 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 DLG3Q92796 817 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 OTUB2Q96DC9 234 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 MRPL38Q96DV4 380 aaKnown RBP13.53□□□□□ -0.24
HCFC2-202ENST00000544223 NSL1Q96IY1 281 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 FAM161BQ96MY7 647 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 PLEKHG4BQ96PX9 1271 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 MCCC1Q96RQ3 725 aaPredicted RBP13.53□□□□□ -0.24
HCFC2-202ENST00000544223 ZFP14Q9HCL3 533 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 PACSIN3Q9UKS6 424 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.53□□□□□ -0.24
HCFC2-202ENST00000544223 COL4A3Q01955 1670 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 OR2AG2A6NM03 316 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 K7ESM1 405 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
HCFC2-202ENST00000544223 GJA4P35212 333 aa13.53□□□□□ -0.24
HCFC2-202ENST00000544223 SPINT3P49223 89 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms