RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 SEC24AO95486 1093 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 S100A9P06702 114 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ENO2P09104 434 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 CXCL8P10145 99 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 LPOP22079 712 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 RPL19P84098 196 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 KCNC3Q14003 757 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SGO1Q5FBB7 561 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 GCNT6Q5T4J0 391 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ATXN7L2Q5T6C5 722 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SULT1C3Q6IMI6 304 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 RELL1Q8IUW5 271 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 RASGRP3Q8IV61 690 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TMEM161BQ8NDZ6 487 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 PJA1Q8NG27 643 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 HASPINQ8TF76 798 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TOX2Q96NM4 488 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 CLCC1Q96S66 551 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 KLF6Q99612 283 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 FDXACB1Q9BRP7 624 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 BTBD1Q9H0C5 482 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SLAMF7Q9NQ25 335 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 EHD3Q9NZN3 535 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 PFDN2Q9UHV9 154 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 PTBP2Q9UKA9 531 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 AXIN1O15169 862 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ADAMDEC1O15204 470 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 APBB3O95704 486 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 PRNPP04156 253 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 CCNB1P14635 433 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 GLRA2P23416 452 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TIE1P35590 1138 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 KHKP50053 298 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 RPL6Q02878 288 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SP140Q13342 867 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TUSC3Q13454 348 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 LCLAT1Q6UWP7 414 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 VSTM1Q6UX27 236 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 USP49Q70CQ1 688 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SLC41A1Q8IVJ1 513 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ARL14Q8N4G2 192 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF513Q8N8E2 541 aaPredicted RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 OR4L1Q8NH43 312 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 BTN2A2Q8WVV5 523 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SGF29Q96ES7 293 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SIPA1Q96FS4 1042 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SCGB3A2Q96PL1 93 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TUBGCP5Q96RT8 1024 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 LACRTQ9GZZ8 138 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TKTL2Q9H0I9 626 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 NOL6Q9H6R4 1146 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SH3GLB1Q9Y371 365 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TMED5Q9Y3A6 229 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 hCG_2014768A0A024R1R8 64 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ACSL4O60488 711 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ENTPD5O75356 428 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 DHFRP00374 187 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 PEPDP12955 493 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 CSF2RAP15509 400 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ALDH4A1P30038 563 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ARHGDIBP52566 201 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 EEFSECP57772 596 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TUBA1BP68363 451 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 PRKG2Q13237 762 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SMAD4Q13485 552 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 C6orf52Q5T4I8 152 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 LYSMD4Q5XG99 296 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TUBA1AQ71U36 451 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 LGI2Q8N0V4 545 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 MAB21L3Q8N8X9 362 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SPPL2AQ8TCT8 520 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 KCTD13Q8WZ19 329 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SPOCK2Q92563 424 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 PAIP1Q9H074 479 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 RHBDL2Q9NX52 303 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SEC14L4Q9UDX3 406 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 GMEB1Q9Y692 573 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 AQP12BA6NM10 295 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 TULP2O00295 520 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CLDN11O75508 207 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SASH3O75995 380 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 KRT33AO76009 404 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 OR6A2O95222 327 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CDH3P22223 829 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 BMPR1AP36894 532 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 REP15Q6BDI9 236 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SLITRK4Q8IW52 837 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 AQP12AQ8IXF9 295 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 PQLC1Q8N2U9 271 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SCAIQ8N9R8 606 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FNDC11Q9BVV2 318 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SLC2A11Q9BYW1 496 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 MCCC2Q9HCC0 563 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SNX15Q9NRS6 342 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 HAT1O14929 419 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 SLC22A1O15245 554 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 FAM189A1O60320 539 aa7.76□□□□□ -1.17
VPS13D-211ENST00000543710 KHDRBS3O75525 346 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 RNASEH2AO75792 299 aaKnown RBP7.76□□□□□ -1.17
VPS13D-211ENST00000543710 CST1P01037 141 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms