RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PEX16Q9Y5Y5 336 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 PAGE1O75459 146 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 OAS1P00973 400 aaKnown RBP19.24■□□□□ 0.67
SUDS3-204ENST00000543473 RAP2AP10114 183 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 GRK4P32298 578 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 CENPAP49450 140 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 SH3D19Q5HYK7 790 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 ARMC8Q8IUR7 673 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 LMO3Q8TAP4 145 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 DDX1Q92499 740 aaKnown RBP19.24■□□□□ 0.67
SUDS3-204ENST00000543473 SOWAHBA6NEL2 793 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 GPR25O00155 361 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 NOBOXO60393 691 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 SCELO95171 688 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 DAG1Q14118 895 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 VN1R5Q7Z5H4 357 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 OR10A6Q8NH74 314 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 NIFKQ9BYG3 293 aaKnown RBP19.24■□□□□ 0.67
SUDS3-204ENST00000543473 ZDHHC2Q9UIJ5 367 aa19.24■□□□□ 0.67
SUDS3-204ENST00000543473 ASPAP45381 313 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 JAG1P78504 1218 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 BTG3Q14201 252 aaPredicted RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 A0A088AWK7 358 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 A0A0G2JLL6 359 aaPredicted RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 CCL22O00626 93 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 OR10H3O60404 316 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 PGLSO95336 258 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 AZGP1P25311 298 aaKnown RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 L1CAMP32004 1257 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 ATAD3BQ5T9A4 648 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 PRRT2Q7Z6L0 340 aaPredicted RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 C10orf53Q8N6V4 93 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 SUN5Q8TC36 379 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 HBEGFQ99075 208 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 SP140LQ9H930 580 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 AGO3Q9H9G7 860 aaKnown RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 ZBTB48P10074 688 aaPredicted RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 AQP1P29972 269 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 RAB25P57735 213 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 SLC25A11Q02978 314 aaKnown RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 PCLAFQ15004 111 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 ARHGAP15Q53QZ3 475 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 DDI2Q5TDH0 399 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 TIFABQ6ZNK6 161 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 TMEM126BQ8IUX1 230 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 SLC25A13Q9UJS0 675 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 UBXN8O00124 270 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 FAM189A1O60320 539 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 UROSP10746 265 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 PIH1D2Q8WWB5 315 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 PRR11Q96HE9 360 aaPredicted RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 NXF3Q9H4D5 531 aaKnown RBP19.23■□□□□ 0.67
SUDS3-204ENST00000543473 ZBTB26Q9HCK0 441 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 PTGFRNQ9P2B2 879 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 ANGPT4Q9Y264 503 aa19.23■□□□□ 0.67
SUDS3-204ENST00000543473 MYOCOSA0A1B0GUC4 107 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 CATP04040 527 aaKnown RBP19.22■□□□□ 0.67
SUDS3-204ENST00000543473 PKMP14618 531 aaKnown RBP19.22■□□□□ 0.67
SUDS3-204ENST00000543473 IKBKEQ14164 716 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 TRMT11Q7Z4G4 463 aaKnown RBP19.22■□□□□ 0.67
SUDS3-204ENST00000543473 MARVELD2Q8N4S9 558 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 TOP6BLQ8N6T0 577 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 LRTM1Q9HBL6 345 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 ST3GAL5Q9UNP4 418 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 LRP6O75581 1613 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 RGPD1P0DJD0 1748 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 KDM3BQ7LBC6 1761 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 TMEM233B4DJY2 109 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 SLC22A1O15245 554 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 SSNA1O43805 119 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 RFPL1O75677 317 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 RPP40O75818 363 aaKnown RBP19.22■□□□□ 0.67
SUDS3-204ENST00000543473 UGT2B4P06133 528 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 CCNCP24863 283 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 PSMA1P25786 263 aaKnown RBP19.22■□□□□ 0.67
SUDS3-204ENST00000543473 MC4RP32245 332 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 ZNF544Q6NX49 715 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 C16orf59Q7L2K0 433 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 CENPSQ8N2Z9 138 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 LPPQ93052 612 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 NLNQ9BYT8 704 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 MMP3P08254 477 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 CRYBB1P53674 252 aaPredicted RBP19.22■□□□□ 0.67
SUDS3-204ENST00000543473 TLR1Q15399 786 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 CDHR3Q6ZTQ4 885 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 OSBPL10Q9BXB5 764 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 GPR88Q9GZN0 384 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 DNAJB9Q9UBS3 223 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 CYP7B1O75881 506 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 PCBP1Q15365 356 aaKnown RBP eCLIP19.22■□□□□ 0.67
SUDS3-204ENST00000543473 ALFQ53S48 1182 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 SDE2Q6IQ49 451 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 TMEM9Q9P0T7 183 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 GTF2A1LQ9UNN4 478 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 DERAQ9Y315 318 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 LYVE1Q9Y5Y7 322 aa19.22■□□□□ 0.67
SUDS3-204ENST00000543473 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
SUDS3-204ENST00000543473 SCN11AQ9UI33 1791 aa19.21■□□□□ 0.67
SUDS3-204ENST00000543473 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.21■□□□□ 0.67
SUDS3-204ENST00000543473 H0Y858 1186 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms