RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TXNL1O43396 289 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 PRPSAP2O60256 369 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ZNF623O75123 536 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 GUCA1CO95843 209 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 KLKB1P03952 638 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 INHBAP08476 426 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 OR52Z1P0C646 297 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 FAM58BPP0C7Q3 252 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ELFN1P0C7U0 828 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 EEF2P13639 858 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 GPTP24298 496 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 TNFRSF8P28908 595 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 GPR12P47775 334 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 CXCR3P49682 368 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 CCT8P50990 548 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 STARD6P59095 220 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 STX1BP61266 288 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 YPEL5P62699 121 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 SIRPAP78324 504 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ASIC1P78348 528 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 NPRL3Q12980 569 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 MTA1Q13330 715 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 KRT33BQ14525 404 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ESCO2Q56NI9 601 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 SGO1Q5FBB7 561 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 C6orf136Q5SQH8 315 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 FAM91A1Q658Y4 838 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 PLA2G4FQ68DD2 849 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 GALNT17Q6IS24 598 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 DPY19L2P1Q6NXN4 242 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 TEX38Q6PEX7 206 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 TMEM270Q6UE05 265 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 MOXD1Q6UVY6 613 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ABRAXAS1Q6UWZ7 409 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 RBM44Q6ZP01 1051 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 CYB5R4Q7L1T6 521 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC29A4Q7RTT9 530 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 RABEPKQ7Z6M1 372 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 PEG10Q86TG7 708 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 IGFN1Q86VF2 1251 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 TMC8Q8IU68 726 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ARHGEF19Q8IW93 802 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 WDR63Q8IWG1 891 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 FBXO39Q8N4B4 442 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ANKRD20A12PQ8NF67 263 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 BEST2Q8NFU1 509 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 WIPF2Q8TF74 440 aaPredicted RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC25A43Q8WUT9 341 aaPredicted RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 KAT2AQ92830 837 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 TEKT1Q969V4 418 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 NXNL1Q96CM4 212 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 EGLN2Q96KS0 407 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 RMDN2Q96LZ7 410 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 WWC2-AS2Q96NR7 200 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 CAMK1GQ96NX5 476 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 NEK1Q96PY6 1258 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 PRAM1Q96QH2 718 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 FCRL5Q96RD9 977 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 TSPAN18Q96SJ8 248 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 CACNG6Q9BXT2 260 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 CHMP4BQ9H444 224 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 INTS10Q9NVR2 710 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 MTMR10Q9NXD2 777 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 LARSQ9P2J5 1176 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 NDRG3Q9UGV2 375 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 HOOK1Q9UJC3 728 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 MAFFQ9ULX9 164 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 COG5Q9UP83 839 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ERVK-11Q9UQG0 969 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ATP6V0A2Q9Y487 856 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 TROQ12816 1431 aaPredicted RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 KIDINS220Q9ULH0 1771 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 SPAG9O60271 1321 aaKnown RBP3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 ITSN2Q9NZM3 1697 aa3.94□□□□□ -1.78
SFSWAP-211ENST00000542813 SAMD9LQ8IVG5 1584 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 SCAF11Q99590 1463 aaKnown RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 RAB3GAP2Q9H2M9 1393 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 LRP5O75197 1615 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 A0A0B4J293 547 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TCRBV5S1A1TA0A578 114 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PIPSLA2A3N6 862 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 H0YIN7 160 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TLR2O60603 784 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 HMMRO75330 724 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 BCAS2O75934 225 aaPredicted RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 NEURL1O76050 574 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 MMP2P08253 660 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 LINGO3P0C6S8 592 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TFPIP10646 304 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ADRA2CP18825 462 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TYMPP19971 482 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 GRIA3P42263 894 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 CRKLP46109 303 aaKnown RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 NAGLUP54802 743 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 TPD52P55327 224 aaPredicted RBP3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC25A3Q00325 362 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 PPATQ06203 517 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 RBPJQ06330 500 aa3.93□□□□□ -1.78
SFSWAP-211ENST00000542813 ACSM1Q08AH1 577 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms