RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ITM2AO43736 263 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 KRT36O76013 467 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 LATS1O95835 1130 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 OLFM2O95897 454 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 CSF1RP07333 972 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 FAM228BP0C875 321 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 HSPA6P17066 643 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 DDX5P17844 614 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 SLC5A2P31639 672 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 VIPR2P41587 438 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 RGS7P49802 495 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 IST1P53990 364 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 MAP3K7CLP57077 242 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 CYP4F2P78329 520 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 UBXN1Q04323 297 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 DHX34Q14147 1143 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 KCNJ12Q14500 433 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 MOGQ16653 247 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 KYNUQ16719 465 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 TMEM266Q2M3C6 531 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 NADK2Q4G0N4 442 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 RNASEH2BQ5TBB1 312 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 KLHDC7AQ5VTJ3 777 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 METTL2BQ6P1Q9 378 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 NFRKBQ6P4R8 1299 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 TRMT10CQ7L0Y3 403 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 PEX26Q7Z412 305 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 HDDC2Q7Z4H3 204 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 MRPL10Q7Z7H8 261 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 C11orf96Q7Z7L8 435 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 GALNT7Q86SF2 657 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 CLVS1Q8IUQ0 354 aaPredicted RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 TBC1D10CQ8IV04 446 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 VPS52Q8N1B4 723 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 JDP2Q8WYK2 163 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 SYN2Q92777 582 aaPredicted RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 FAM149B1Q96BN6 582 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 PAGE5Q96GU1 130 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 PLEKHA8Q96JA3 519 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 DNAJC1Q96KC8 554 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 CNDP2Q96KP4 475 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 SPATA17Q96L03 361 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 TGS1Q96RS0 853 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 RMDN3Q96TC7 470 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 P2RX7Q99572 595 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 CCDC77Q9BR77 488 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 GON7Q9BXV9 100 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 RHOBTB2Q9BYZ6 727 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 TRPV6Q9H1D0 765 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 RNF41Q9H4P4 317 aaPredicted RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 RMND5AQ9H871 391 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 PPCSQ9HAB8 311 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 SCPEP1Q9HB40 452 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 MAGEE1Q9HCI5 957 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 NRIP3Q9NQ35 241 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 C12orf4Q9NQ89 552 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 C8orf4Q9NR00 106 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 SLC38A7Q9NVC3 462 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 DDX18Q9NVP1 670 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 NKIRAS1Q9NYS0 192 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 NCKIPSDQ9NZQ3 722 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 HACD3Q9P035 362 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 TMEM9Q9P0T7 183 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 SENP1Q9P0U3 644 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 ANKMY1Q9P2S6 941 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 UBA2Q9UBT2 640 aaPredicted RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 HMGXB4Q9UGU5 601 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 ERGIC3Q9Y282 383 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 WBP11Q9Y2W2 641 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 KDM3AQ9Y4C1 1321 aa5.88□□□□□ -1.47
XRCC4-206ENST00000542685 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.88□□□□□ -1.47
XRCC4-206ENST00000542685 A0A0B4J203 849 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 A0A0G2JLW4 131 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ARHGEF35A5YM69 484 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 SMIM23A6NLE4 172 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 OR5K4A6NMS3 321 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 K7EPI3 171 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 LAD1O00515 517 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 GYG2O15488 501 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CLOCKO15516 846 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 BUD23O43709 281 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 NMT2O60551 498 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 TMCC2O75069 709 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ABLIM3O94929 683 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ECDO95905 644 aaPredicted RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 PAHP00439 452 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 HMGN1P05114 100 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 UQCRFS1P1P0C7P4 283 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 KRT5P13647 590 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 IL10P22301 178 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CERS1P27544 350 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CHKAP35790 457 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ALDH3B2P48448 385 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 AP2S1P53680 142 aaPredicted RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 VCPP55072 806 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 P2RX3P56373 397 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ACTR3P61158 418 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 RAB1AP62820 205 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 PPP2R2BQ00005 443 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms