RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 UGT1A9O60656 530 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 RPLP0P05388 317 aaKnown RBP15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 ACP5P13686 325 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 UGT1A6P19224 532 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 UGT1A1P22309 533 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 UGT1A4P22310 534 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 UGT1A3P35503 534 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 UGT1A5P35504 534 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 ZNF140P52738 457 aaPredicted RBP15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 SPIDRQ14159 915 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 FAM151BQ6UXP7 276 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 ZNF547Q8IVP9 402 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 OR4K2Q8NGD2 314 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 LRRC45Q96CN5 670 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 PDLIM2Q96JY6 352 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 LRRN3Q9H3W5 708 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 UGT1A7Q9HAW7 530 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 UGT1A10Q9HAW8 530 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 UGT1A8Q9HAW9 530 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 SMOXQ9NWM0 555 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 TBC1D29Q9UFV1 150 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 SLC23A2Q9UGH3 650 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 ZNF148Q9UQR1 794 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 DRG1Q9Y295 367 aaKnown RBP15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 ENTPD2Q9Y5L3 495 aa15.26■□□□□ 0.03
ECHDC2-223ENST00000542552 ERI2A8K979 691 aaKnown RBP15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 AGAP14A8MT82 685 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 D6RAR5 112 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 KMOO15229 486 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 PPM1DO15297 605 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 GPR39O43194 453 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 B4GAT1O43505 415 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 MTX2O75431 263 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 CDK14O94921 469 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 CRTAMO95727 393 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 FGGP02679 453 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 GPR3P46089 330 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 FASLGP48023 281 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 XIAPP98170 497 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 PDE1BQ01064 536 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 TMEM115Q12893 351 aaPredicted RBP15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 SNX1Q13596 522 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 ITGA9Q13797 1035 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 C11orf96Q7Z7L8 435 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 LRRTM4Q86VH4 590 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 SFRP1Q8N474 314 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 Q8N9G6 341 aaPredicted RBP15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 DDHD1Q8NEL9 900 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 MAIP1Q8WWC4 291 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 ATXN7L3BQ96GX2 97 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 GFM1Q96RP9 751 aaKnown RBP15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 TIMM29Q9BSF4 260 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 KCNK6Q9Y257 313 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 JRKLQ9Y4A0 524 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 KIF26BQ2KJY2 2108 aa15.25■□□□□ 0.03
ECHDC2-223ENST00000542552 RHPN2P1A8MT19 583 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 DXOO77932 396 aaKnown RBP15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 SUN1O94901 812 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 PRAMEF1O95521 474 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 ZNF7P17097 686 aaPredicted RBP15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 PSMA3P25788 255 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 CXCR5P32302 372 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 FDFT1P37268 417 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 LSSP48449 732 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 SQSTM1Q13501 440 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 LDLRAP1Q5SW96 308 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 GPRC6AQ5T6X5 926 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 IYDQ6PHW0 289 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 GLIS1Q8NBF1 620 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 OR13C4Q8NGS5 318 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 ZNF398Q8TD17 642 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 SLC37A2Q8TED4 501 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 POLR1BQ9H9Y6 1135 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 ETNK1Q9HBU6 452 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 FKBPLQ9UIM3 349 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 AK5Q9Y6K8 562 aa15.24■□□□□ 0.03
ECHDC2-223ENST00000542552 ZSCAN12O43309 604 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 CEP104O60308 925 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 BRINP1O60477 761 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 SRP72O76094 671 aaKnown RBP15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 IFNB1P01574 187 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 F3P13726 295 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 ETS1P14921 441 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 TPH1P17752 444 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 OR1D5P58170 312 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 ZFP36L1Q07352 338 aaKnown RBP15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 NFATC2Q13469 925 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 SEMA5AQ13591 1074 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 CLPPQ16740 277 aaPredicted RBP15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 IGF2-ASQ6U949 168 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 CRTC3Q6UUV7 619 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 TMPRSS9Q7Z410 1059 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 B3GNT8Q7Z7M8 397 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 PRUNE1Q86TP1 453 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 LINC00523Q86TU6 105 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 TAB3Q8N5C8 712 aaPredicted RBP15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 RASGEF1AQ8N9B8 481 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 GDAP1Q8TB36 358 aa15.23■□□□□ 0.03
ECHDC2-223ENST00000542552 LIN37Q96GY3 246 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms