RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 BPIFA3Q9BQP9 254 aa15.25■□□□□ 0.03
CLSTN3-213ENST00000541953 CARD9Q9H257 536 aa15.25■□□□□ 0.03
CLSTN3-213ENST00000541953 ANAPC2Q9UJX6 822 aa15.25■□□□□ 0.03
CLSTN3-213ENST00000541953 CROTQ9UKG9 612 aa15.25■□□□□ 0.03
CLSTN3-213ENST00000541953 SHOC2Q9UQ13 582 aa15.25■□□□□ 0.03
CLSTN3-213ENST00000541953 DNAJC16Q9Y2G8 782 aa15.25■□□□□ 0.03
CLSTN3-213ENST00000541953 KCNMB2Q9Y691 235 aa15.25■□□□□ 0.03
CLSTN3-213ENST00000541953 KIR2DS5A0A0G2JLQ3 304 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 A0A0G2JNG1 304 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 OR52A4PA6NMU1 304 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 ANKRD66B4E2M5 251 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 KIR2DS3K7RE56 304 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 CAPN5O15484 640 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 MTSS1O43312 755 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 JCHAINP01591 159 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 ANKRD34CP0C6C1 535 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 TCN2P20062 427 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 DLSTP36957 453 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 KIR2DS5Q14953 304 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 IQCB1Q15051 598 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 LACTB2Q53H82 288 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 CCDC122Q5T0U0 273 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 HIST2H2BCQ6DN03 193 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 TMEM26Q6ZUK4 368 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 LRRC49Q8IUZ0 686 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 PHYKPLQ8IUZ5 450 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 APOBEC4Q8WW27 367 aaKnown RBP15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 RAPGEF5Q92565 580 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 FATE1Q969F0 183 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 HDAC11Q96DB2 347 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 ZNF670Q9BS34 389 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 MLPHQ9BV36 600 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 PACSIN1Q9BY11 444 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 ULBP3Q9BZM4 244 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 RMI1Q9H9A7 625 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 AKIRIN1Q9H9L7 192 aaPredicted RBP15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 PKD2L2Q9NZM6 624 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 MAN2B2Q9Y2E5 1009 aa15.24■□□□□ 0.03
CLSTN3-213ENST00000541953 AURKAO14965 403 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 CHUKO15111 745 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 DNAJB5O75953 348 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 KIAA0754O94854 1291 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 UBXN7O94888 489 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 RPL10P27635 214 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 CA5AP35218 305 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 DRG2P55039 364 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 MLLT10P55197 1068 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 RPL26P61254 145 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 ERV3-1Q14264 604 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 NOMO1Q15155 1222 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 TIGD7Q6NT04 549 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 CCDC13Q8IYE1 715 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 PLD5Q8N7P1 536 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 MIB2Q96AX9 1013 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 SH3KBP1Q96B97 665 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 OR6C1Q96RD1 312 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 ZPBPQ9BS86 351 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 SPATA16Q9BXB7 569 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 STN1Q9H668 368 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 DNPEPQ9ULA0 475 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 RPL26L1Q9UNX3 145 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 WDR37Q9Y2I8 494 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 SPO11Q9Y5K1 396 aa15.23■□□□□ 0.03
CLSTN3-213ENST00000541953 PRRC2CQ9Y520 2896 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 MYO1FO00160 1098 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 GPR39O43194 453 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 SLC25A14O95258 325 aaPredicted RBP15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 XRCC1P18887 633 aaPredicted RBP15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 CLCNKAP51800 687 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 PPIDQ08752 370 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 MAP7Q14244 749 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 FILIP1LQ4L180 1135 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 FIGNQ5HY92 759 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 ZNF569Q5MCW4 686 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 NPNTQ6UXI9 565 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 CERS6Q6ZMG9 384 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 FAM92BQ6ZTR7 304 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 C11orf96Q7Z7L8 435 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 PLXDC1Q8IUK5 500 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 LURAP1LQ8IV03 231 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 RAVER1Q8IY67 606 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 ESX1Q8N693 406 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 KCTD6Q8NC69 237 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 CCNYQ8ND76 341 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 GPR150Q8NGU9 434 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 CPLX3Q8WVH0 158 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 GLYATL1Q969I3 302 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 ZNF768Q9H5H4 540 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 ZFYVE1Q9HBF4 777 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 TRIM10Q9UDY6 481 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 AMACRQ9UHK6 382 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 ZNF711Q9Y462 761 aa15.22■□□□□ 0.03
CLSTN3-213ENST00000541953 PROSCO94903 275 aa15.21■□□□□ 0.03
CLSTN3-213ENST00000541953 SERPING1P05155 500 aa15.21■□□□□ 0.03
CLSTN3-213ENST00000541953 BPIP17213 487 aa15.21■□□□□ 0.03
CLSTN3-213ENST00000541953 CES1P23141 567 aa15.21■□□□□ 0.03
CLSTN3-213ENST00000541953 CAPZBP47756 277 aa15.21■□□□□ 0.03
CLSTN3-213ENST00000541953 UQCRFS1P47985 274 aa15.21■□□□□ 0.03
CLSTN3-213ENST00000541953 IFI35P80217 286 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms