RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 PIAS3Q9Y6X2 628 aa8.62□□□□□ -1.03
THBS3-210ENST00000541576 GOLGA8CPA6NN73 597 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 C1QTNF3-AMACRE9PGA6 284 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 K7EQS6 105 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 OR1I1O60431 355 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 FDXRP22570 491 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 WASP42768 502 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 PTGER3P43115 390 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 SPINT3P49223 89 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 METAP1P53582 386 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 SEC13P55735 322 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 BNIP1Q12981 228 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 RCN1Q15293 331 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 CHRNA6Q15825 494 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 GPR33Q49SQ1 333 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 FBXL19Q6PCT2 694 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 TMEM207Q6UWW9 146 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 SERPINA9Q86WD7 417 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 NUDCD3Q8IVD9 361 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 MMAAQ8IVH4 418 aaKnown RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 FAM13CQ8NE31 585 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 ARRDC3Q96B67 414 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 NXNL1Q96CM4 212 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 ERLEC1Q96DZ1 483 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 PLEKHG4BQ96PX9 1271 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 NMRAL1Q9HBL8 299 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 CRLS1Q9UJA2 301 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 RUVBL2Q9Y230 463 aaKnown RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 ZNF106Q9H2Y7 1883 aaKnown RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 EDF1O60869 148 aaKnown RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 KLHL2O95198 593 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 SBK3P0C264 359 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 ALDH3A1P30838 453 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 TIE1P35590 1138 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 MMP12P39900 470 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 KIR2DL1P43626 348 aaPredicted RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 ENPP2Q13822 863 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 DBN1Q16643 649 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 Q7L0L9 218 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 OTOAQ7RTW8 1153 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 PIM3Q86V86 326 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 RALGPS2Q86X27 583 aaPredicted RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 DNASE1L2Q92874 299 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 HLA-CQ95604 372 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 FAM136AQ96C01 138 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 BIRC8Q96P09 236 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 LRRC37BQ96QE4 947 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 C8orf33Q9H7E9 229 aaPredicted RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 HEBP1Q9NRV9 189 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 SCOCQ9UIL1 159 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 TRBV5-4A0A0C4DH59 114 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 PRMT5O14744 637 aaPredicted RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 BIRC5O15392 142 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 KRT36O76013 467 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 RHOBTB1O94844 696 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 PKMP14618 531 aaKnown RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 FOSL2P15408 326 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 ZNF7P17097 686 aaPredicted RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 UGT1A6P19224 532 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 UGT1A1P22309 533 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 UGT1A4P22310 534 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 UGT1A3P35503 534 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 UGT1A5P35504 534 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 GLRBP48167 497 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 PSMD8P48556 350 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 ADARP55265 1226 aaKnown RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 ZBTB16Q05516 673 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 RALGDSQ12967 914 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 RIPK1Q13546 671 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 PCLAFQ15004 111 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 CHI3L2Q15782 390 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 CFAP157Q5JU67 520 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 LYPLAL1Q5VWZ2 237 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 ZCCHC23Q6ZST2 131 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 HSD11B1LQ7Z5J1 315 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 C10orf107Q8IVU9 208 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 TRIM42Q8IWZ5 723 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 ANKRD49Q8WVL7 239 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 ABTB1Q969K4 478 aaPredicted RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 CCDC97Q96F63 343 aaPredicted RBP8.61□□□□□ -1.03
THBS3-210ENST00000541576 TBC1D10AQ9BXI6 508 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 RNPEPL1Q9HAU8 725 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 NPHS2Q9NP85 383 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 TAS2R13Q9NYV9 303 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 CD84Q9UIB8 345 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 LNPEPQ9UIQ6 1025 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 MED16Q9Y2X0 877 aa8.61□□□□□ -1.03
THBS3-210ENST00000541576 A0A0G2JND7 137 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ANKRD33BA6NCL7 494 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 G3V2L1 256 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 AHCYL1O43865 530 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 SYNCRIPO60506 623 aaKnown RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 WISP3O95389 354 aaPredicted RBP8.6□□□□□ -1.03
THBS3-210ENST00000541576 ESR1P03372 595 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 APOA4P06727 396 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ASGR2P07307 311 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ELFN1P0C7U0 828 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 CALB2P22676 271 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 ACRV1P26436 265 aa8.6□□□□□ -1.03
THBS3-210ENST00000541576 SUOXP51687 545 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms