RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 MYLK3Q32MK0 819 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 NADK2Q4G0N4 442 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 CBWD6Q4V339 395 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 CBWD3Q5JTY5 395 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 CBWD5Q5RIA9 395 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 PAPD7Q5XG87 772 aaKnown RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 KCTD16Q68DU8 428 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 FOXR2Q6PJQ5 311 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 LRRC31Q6UY01 552 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 GDPD4Q6W3E5 623 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 SPOCD1Q6ZMY3 1216 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 ARHGAP22Q7Z5H3 698 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 HPS6Q86YV9 775 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 MCEMP1Q8IX19 187 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 GRAMD1CQ8IYS0 662 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 CEP57L1Q8IYX8 460 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 DEFB106AQ8N104 65 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 RYBPQ8N488 228 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 BVESQ8NE79 360 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 OR7D4Q8NG98 312 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 OR2AP1Q8NGE2 309 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 OR6K2Q8NGY2 324 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 PDCD6IPQ8WUM4 868 aaKnown RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 OR1E3Q8WZA6 343 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 VOPP1Q96AW1 172 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 RCC1LQ96I51 464 aaKnown RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 C1orf74Q96LT6 269 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 KLHL32Q96NJ5 620 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 WRAP53Q9BUR4 548 aaKnown RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 TM6SF2Q9BZW4 377 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 UNKQ9C0B0 810 aaKnown RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 SIK2Q9H0K1 926 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 TMEM168Q9H0V1 697 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 FGF22Q9HCT0 170 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 MLXIPLQ9NP71 852 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 MRPL40Q9NQ50 206 aaKnown RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 SPATS2LQ9NUQ6 558 aaKnown RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 TMEM51Q9NW97 253 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 ASNSD1Q9NWL6 643 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 COX16Q9P0S2 106 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 KCND3Q9UK17 655 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 TMEM59LQ9UK28 342 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 CTNND2Q9UQB3 1225 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 EMC9Q9Y3B6 208 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 OR1A2Q9Y585 309 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 PCDHB4Q9Y5E5 795 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 MRPS18BQ9Y676 258 aaKnown RBP4.6□□□□□ -1.67
SNHG1-214ENST00000540865 SCN8AQ9UQD0 1980 aa4.6□□□□□ -1.67
SNHG1-214ENST00000540865 ARHGAP10A1A4S6 786 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CFAP69A5D8W1 941 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 E5RJQ4 531 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 POLR1CO15160 346 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CETN3O15182 167 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 DPM1O60762 260 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 HSF2BPO75031 334 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CREG1O75629 220 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CBX6O95503 412 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 YEATS4O95619 227 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CD160O95971 181 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 PCCBP05166 539 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 MYL1P05976 194 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 EPB41P11171 864 aaKnown RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CSF2RBP32927 897 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 TRIM23P36406 574 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CXCR3P49682 368 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 GNA12Q03113 381 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 RAD51Q06609 339 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ILF3Q12906 894 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 LRMPQ12912 555 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 NME3Q13232 169 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 SF1Q15637 639 aaKnown RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ZXDCQ2QGD7 858 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ZCWPW2Q504Y3 356 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 PRR30Q53SZ7 412 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 BRMS1LQ5PSV4 323 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ZNF648Q5T619 568 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 NKAIN2Q5VXU1 208 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 SP5Q6BEB4 398 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 JMJD6Q6NYC1 403 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 DENND1BQ6P3S1 775 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 WDR74Q6RFH5 385 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 SPATC1Q76KD6 591 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 TFAP2DQ7Z6R9 452 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ZNF227Q86WZ6 799 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 NRROSQ86YC3 692 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 GUF1Q8N442 669 aaKnown RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 Q8NA96 180 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CCL4L1Q8NHW4 92 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 HCAR2Q8TDS4 363 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 THAP4Q8WY91 577 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 SEC14L1Q92503 715 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 UBXN4Q92575 508 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 ARHGEF2Q92974 986 aaKnown RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 FUBP1Q96AE4 644 aaKnown RBP4.59□□□□□ -1.67
SNHG1-214ENST00000540865 PAGE5Q96GU1 130 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 CTRCQ99895 268 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 G6PC3Q9BUM1 346 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 SLC25A23Q9BV35 468 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 GSDMCQ9BYG8 508 aa4.59□□□□□ -1.67
SNHG1-214ENST00000540865 TWSG1Q9GZX9 223 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms