RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 LGALS12Q96DT0 336 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 MMABQ96EY8 250 aaPredicted RBP3.42□□□□□ -1.86
MDM2-227ENST00000540709 NR1H4Q96RI1 486 aaPredicted RBP3.42□□□□□ -1.86
MDM2-227ENST00000540709 PIGMQ9H3S5 423 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 SLC13A4Q9UKG4 626 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 GJD2Q9UKL4 321 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 C2CD2Q9Y426 696 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 LRRFIP2Q9Y608 721 aaKnown RBP3.42□□□□□ -1.86
MDM2-227ENST00000540709 PRKNO60260 465 aaPredicted RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 SYNCRIPO60506 623 aaKnown RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 JRKO75564 520 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 BAG4O95429 457 aaKnown RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 GNAZP19086 355 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 UGT1A1P22309 533 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 EPHA8P29322 1005 aaPredicted RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 MAP2K2P36507 400 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 MBTD1Q05BQ5 628 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 PPIGQ13427 754 aaKnown RBP eCLIP3.41□□□□□ -1.86
MDM2-227ENST00000540709 PNLIPRP3Q17RR3 467 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 KRTCAP3Q53RY4 240 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 ACAD10Q6JQN1 1059 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 ZNF790Q6PG37 636 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 PAPD4Q6PIY7 484 aaKnown RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 RBMS3Q6XE24 437 aaKnown RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 ANO5Q75V66 913 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 DBF4BQ8NFT6 615 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 RDM1Q8NG50 284 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 OR1J2Q8NGS2 313 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 HM13Q8TCT9 377 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 HCAR2Q8TDS4 363 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 PPP4R1Q8TF05 950 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 INTS12Q96CB8 462 aaKnown RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 PRMT6Q96LA8 375 aaPredicted RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 PDCL3Q9H2J4 239 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 RAD21L1Q9H4I0 556 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 RANGRFQ9HD47 186 aaPredicted RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 SLC38A7Q9NVC3 462 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 TAS2R10Q9NYW0 307 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 KLHL9Q9P2J3 617 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 ZNF624Q9P2J8 865 aaPredicted RBP3.41□□□□□ -1.86
MDM2-227ENST00000540709 CRYL1Q9Y2S2 319 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 SNED1Q8TER0 1413 aa3.41□□□□□ -1.86
MDM2-227ENST00000540709 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 A6NLC8 198 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 PLOD2O00469 737 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 ATP2A1O14983 1001 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 SLC25A12O75746 678 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 CD48P09326 243 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 ZNF23P17027 643 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 MCCP23508 829 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 ICAM3P32942 547 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 PRCPP42785 496 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 OLR1P78380 273 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 CEBPZQ03701 1054 aaKnown RBP3.4□□□□□ -1.87
MDM2-227ENST00000540709 RUNX1T1Q06455 604 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 GOLGA8DPQ0D2H9 430 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 FCN2Q15485 313 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 NAB2Q15742 525 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 CCNG2Q16589 344 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 KRT71Q3SY84 523 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 TECRLQ5HYJ1 363 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 NSUN5P2Q63ZY6 315 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 ZNF497Q6ZNH5 498 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 R3HCC1LQ7Z5L2 792 aaKnown RBP3.4□□□□□ -1.87
MDM2-227ENST00000540709 PRAG1Q86YV5 1406 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 EMC1Q8N766 993 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 METTL6Q8TCB7 284 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 FCAMRQ8WWV6 532 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 ZKSCAN4Q969J2 545 aaPredicted RBP3.4□□□□□ -1.87
MDM2-227ENST00000540709 ABHD8Q96I13 439 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 LRR1Q96L50 414 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 SIL1Q9H173 461 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 WASH6PQ9NQA3 447 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 CLIC4Q9Y696 253 aa3.4□□□□□ -1.87
MDM2-227ENST00000540709 ZBTB43O43298 467 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 SEC14L2O76054 403 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 BMP10O95393 424 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 TFAP2AP05549 437 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 LIPFP07098 398 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 PRSS56P0CW18 603 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 MSH3P20585 1137 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 PBX3P40426 434 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 ZNF805Q5CZA5 627 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 PLXDC2Q6UX71 529 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 CCDC190Q86UF4 302 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 RASGEF1CQ8N431 466 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 SLC5A8Q8N695 610 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 OR8K5Q8NH50 307 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 ARHGEF26Q96DR7 871 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 C17orf77Q96MU5 243 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 LTB4R2Q9NPC1 389 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 ABI3Q9P2A4 366 aa3.39□□□□□ -1.87
MDM2-227ENST00000540709 MRPS28Q9Y2Q9 187 aaKnown RBP3.39□□□□□ -1.87
MDM2-227ENST00000540709 A0A1W2PPH5 198 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 ANKRD66B4E2M5 251 aa3.38□□□□□ -1.87
MDM2-227ENST00000540709 TGFB1I1O43294 461 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms