RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 LPOP22079 712 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-212ENST00000540230 LRP8Q14114 963 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 SPIDRQ14159 915 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 RTP5Q14D33 572 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 P3H1Q32P28 736 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 RBM44Q6ZP01 1051 aaKnown RBP14.88□□□□□ -0.03
UBE3B-212ENST00000540230 TMPRSS9Q7Z410 1059 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 CCNJLQ8IV13 435 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 OR6C4Q8NGE1 309 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 BRSK1Q8TDC3 778 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 SLC37A2Q8TED4 501 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 NAT14Q8WUY8 206 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 NXPE2Q96DL1 559 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 ATXN7L3BQ96GX2 97 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 FRMD8P1Q9BZ68 369 aaPredicted RBP14.88□□□□□ -0.03
UBE3B-212ENST00000540230 NRSN2Q9GZP1 204 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 LRRN3Q9H3W5 708 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 RMI1Q9H9A7 625 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 DKK4Q9UBT3 224 aa14.88□□□□□ -0.03
UBE3B-212ENST00000540230 A6NCN8 305 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 D6RAR5 112 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 B4GAT1O43505 415 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 LDB2O43679 373 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 CEP104O60308 925 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 TCEA3O75764 348 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 CDK14O94921 469 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 PRAMEF1O95521 474 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 MPOP05164 745 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 STIP1P31948 543 aaKnown RBP14.87□□□□□ -0.03
UBE3B-212ENST00000540230 ZNF140P52738 457 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-212ENST00000540230 TMPRSS15P98073 1019 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 XIAPP98170 497 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 B4GALNT1Q00973 533 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 GPRC6AQ5T6X5 926 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 ZNF438Q7Z4V0 828 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 C11orf96Q7Z7L8 435 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 GDAP1Q8TB36 358 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 DTX3LQ8TDB6 740 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 CCDC97Q96F63 343 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-212ENST00000540230 PDLIM2Q96JY6 352 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 PPP1R2P1Q96PQ5 205 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 FOXP3Q9BZS1 431 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 LRRC40Q9H9A6 602 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 ETNK1Q9HBU6 452 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 RAXQ9Y2V3 346 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 C2orf81A6NN90 581 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 BRINP1O60477 761 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 SNX2O60749 519 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 KRT37O76014 449 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 PNLIPP16233 465 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 GRIA1P42261 906 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 KCNJ1P48048 391 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 CTSCP53634 463 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 OR1D5P58170 312 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 TMEM115Q12893 351 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-212ENST00000540230 PEX6Q13608 980 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 CCNG2Q16589 344 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 ZDHHC20Q5W0Z9 365 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 LRRTM4Q86VH4 590 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 ZNF761Q86XN6 746 aaPredicted RBP14.87□□□□□ -0.03
UBE3B-212ENST00000540230 SFRP1Q8N474 314 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 DDHD1Q8NEL9 900 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 DNAJC1Q96KC8 554 aaKnown RBP14.87□□□□□ -0.03
UBE3B-212ENST00000540230 GFM1Q96RP9 751 aaKnown RBP14.87□□□□□ -0.03
UBE3B-212ENST00000540230 PRDM8Q9NQV8 689 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 KLC4Q9NSK0 619 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 TRMT1Q9NXH9 659 aaKnown RBP14.87□□□□□ -0.03
UBE3B-212ENST00000540230 DNAJC16Q9Y2G8 782 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 AK5Q9Y6K8 562 aa14.87□□□□□ -0.03
UBE3B-212ENST00000540230 PRR19A6NJB7 356 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 TLX3O43711 291 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-212ENST00000540230 VEGFDO43915 354 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 PPFIA2O75334 1257 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 SRP72O76094 671 aaKnown RBP14.86□□□□□ -0.03
UBE3B-212ENST00000540230 GABREP78334 506 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 POU6F1Q14863 301 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 NR1D2Q14995 579 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 INSCQ1MX18 579 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 C3orf38Q5JPI3 329 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 SLC35F6Q8N357 371 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 RASGEF1AQ8N9B8 481 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 OR52K1Q8NGK4 314 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 WDR48Q8TAF3 677 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 ZNF398Q8TD17 642 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 MS4A14Q96JA4 679 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 OSGEPL1Q9H4B0 414 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 RDH14Q9HBH5 336 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 SMOXQ9NWM0 555 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 SMARCAL1Q9NZC9 954 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 SCHIP1Q9P0W5 487 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-212ENST00000540230 SATB2Q9UPW6 733 aa14.86□□□□□ -0.03
UBE3B-212ENST00000540230 ANKRD11Q6UB99 2663 aaPredicted RBP14.86□□□□□ -0.03
UBE3B-212ENST00000540230 CCDC78A2IDD5 438 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 USP27XA6NNY8 438 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 RHPN2P1A8MT19 583 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 GPR89AB7ZAQ6 455 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 AGRPO00253 132 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 CRTAMO95727 393 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 GPR89BP0CG08 455 aa14.85□□□□□ -0.03
UBE3B-212ENST00000540230 PRSS56P0CW18 603 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms