RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PREBQ9HCU5 417 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 TRMT6Q9UJA5 497 aaKnown RBP13.54□□□□□ -0.24
BNIP3-202ENST00000540159 VCANP13611 3396 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 CCDC154A6NI56 674 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 PAPSS2O95340 614 aaPredicted RBP13.54□□□□□ -0.24
BNIP3-202ENST00000540159 VNN2O95498 520 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 PYGLP06737 847 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 ATF6P18850 670 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 CA5AP35218 305 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 NR1H2P55055 460 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 OR4D2P58180 307 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 TMED1Q13445 227 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 LAPTM5Q13571 262 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 SLC14A2Q15849 920 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 KANK2Q63ZY3 851 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 ANKRD34AQ69YU3 496 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 FAM117BQ6P1L5 589 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 FAM151BQ6UXP7 276 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 MBOAT1Q6ZNC8 495 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 TMCO2Q7Z6W1 182 aaPredicted RBP13.54□□□□□ -0.24
BNIP3-202ENST00000540159 TEX26Q8N6G2 289 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 DBF4BQ8NFT6 615 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 TCF12Q99081 682 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 BOCQ9BWV1 1114 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 OSBPL11Q9BXB4 747 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 SLC2A11Q9BYW1 496 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 AFF4Q9UHB7 1163 aaKnown RBP13.54□□□□□ -0.24
BNIP3-202ENST00000540159 RAI2Q9Y5P3 530 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 CEPT1Q9Y6K0 416 aa13.54□□□□□ -0.24
BNIP3-202ENST00000540159 VWA8A3KMH1 1905 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 WASH4PA8MWX3 477 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 STX7O15400 261 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 AP1G1O43747 822 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 WISP3O95389 354 aaPredicted RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 IL10P22301 178 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 NR4A1P22736 598 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 NFKBIAP25963 317 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 APOFQ13790 326 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 PARP15Q460N3 678 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 LRRC73Q5JTD7 316 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 ARMC12Q5T9G4 340 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 RNF219Q5W0B1 726 aaPredicted RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 LETMD1Q6P1Q0 360 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 TBPL2Q6SJ96 375 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 ERMP1Q7Z2K6 904 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 CARM1Q86X55 608 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 CCDC117Q8IWD4 279 aaPredicted RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 HS3ST5Q8IZT8 346 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 METTL6Q8TCB7 284 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 TRMOQ9BU70 441 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 ADI1Q9BV57 179 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 TDRD1Q9BXT4 1180 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 AGO1Q9UL18 857 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 H0Y626 953 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 TRMUO75648 421 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 TRIM16O95361 564 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 PRLP01236 227 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 CAPN1P07384 714 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 RHOCP08134 193 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 CHRM1P11229 460 aaPredicted RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 FASP25445 335 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 PTGR1Q14914 329 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 NR6A1Q15406 480 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 NHSL2Q5HYW2 709 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 GPSM1Q86YR5 675 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 LRRC49Q8IUZ0 686 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 CARNMT1Q8N4J0 409 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 SNRNP27Q8WVK2 155 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 EZH1Q92800 747 aaPredicted RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 FEM1CQ96JP0 617 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 ZFRQ96KR1 1074 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 BIRC8Q96P09 236 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 NAA50Q9GZZ1 169 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 FARSBQ9NSD9 589 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 UTS2RQ9UKP6 389 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 DMTF1Q9Y222 760 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 CASP8AP2Q9UKL3 1982 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 C2orf78A6NCI8 922 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 C2orf81A6NN90 581 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 DLGAP1O14490 977 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 INSIG1O15503 277 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 KERAO60938 352 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 UGT1A1P22309 533 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 UGT1A4P22310 534 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 EEF1B2P24534 225 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 CORO1AP31146 461 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 UGT1A3P35503 534 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 UGT1A5P35504 534 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 HSPA13P48723 471 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 SLC11A1P49279 550 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 FKBP1BP68106 108 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 HMGCS1Q01581 520 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 DSC1Q08554 894 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 SCML4Q8N228 414 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 KIAA1191Q96A73 305 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 C8orf48Q96LL4 319 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 PPP1R2P1Q96PQ5 205 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms