RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 TMEM191CA6NGB0 347 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 A8MU76 341 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 FAM25AB3EWG3 89 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 FAM25CB3EWG5 89 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 FAM25GB3EWG6 89 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 CFAP99D6REC4 459 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 CCNT2O60583 730 aaKnown RBP12.52□□□□□ -0.41
DDX55-206ENST00000539934 POLBP06746 335 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 EDN3P14138 238 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 NCF2P19878 526 aaPredicted RBP12.52□□□□□ -0.41
DDX55-206ENST00000539934 CHRNA3P32297 505 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 HYAL1Q12794 435 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 BAMBIQ13145 260 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 RAPSNQ13702 412 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 LLGL1Q15334 1064 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ATAD3BQ5T9A4 648 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 C9orf57Q5W0N0 161 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.41
DDX55-206ENST00000539934 PDSS2Q86YH6 399 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 FIBCD1Q8N539 461 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 WDR48Q8TAF3 677 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 MAGOHBQ96A72 148 aaKnown RBP12.52□□□□□ -0.41
DDX55-206ENST00000539934 C18orf8Q96DM3 657 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 PDXPQ96GD0 296 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 RNF39Q9H2S5 420 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
DDX55-206ENST00000539934 SNX6Q9UNH7 406 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 GAB2Q9UQC2 676 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ATG2AQ2TAZ0 1938 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 MBTPS2O43462 519 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 CCNKO75909 580 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 KRT36O76013 467 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ANXA6P08133 673 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ETV5P41161 510 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 MMP13P45452 471 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 CARD18P57730 90 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 MAGOHP61326 146 aaKnown RBP12.52□□□□□ -0.41
DDX55-206ENST00000539934 TCF15Q12870 199 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 PDK3Q15120 406 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 SUSD1Q6UWL2 747 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ZYG11AQ6WRX3 759 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ZNF852Q6ZMS4 543 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ADGRG6Q86SQ4 1221 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 ADGRF2Q8IZF7 708 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 PLD5Q8N7P1 536 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 PRELID2Q8N945 189 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 DEPDC1BQ8WUY9 529 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 YIPF5Q969M3 257 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 TOP1MTQ969P6 601 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 BTBD9Q96Q07 612 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 CLSTN3Q9BQT9 956 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 MRPL45Q9BRJ2 306 aaKnown RBP12.52□□□□□ -0.41
DDX55-206ENST00000539934 BCAP29Q9UHQ4 241 aa12.52□□□□□ -0.41
DDX55-206ENST00000539934 NOVA2Q9UNW9 492 aaKnown RBP12.52□□□□□ -0.41
DDX55-206ENST00000539934 NLRC5Q86WI3 1866 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 TCRBV5S1A1TA0A578 114 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 TCRBV7S2A1N4TA0A589 114 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 MTMR11A4FU01 709 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 FAM221BA6H8Z2 402 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 H3BNX3 289 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 PER2O15055 1255 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 CD48P09326 243 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 TAS2R40P59535 323 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 PCDH1Q08174 1060 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 SELPLGQ14242 412 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 CLCA4Q14CN2 919 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 CDK10Q15131 360 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 SMAD2Q15796 467 aaKnown RBP12.51□□□□□ -0.41
DDX55-206ENST00000539934 PFKFB4Q16877 469 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 FBXO47Q5MNV8 452 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 CCDC137Q6PK04 289 aaKnown RBP12.51□□□□□ -0.41
DDX55-206ENST00000539934 TXNDC11Q6PKC3 985 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 HDDC2Q7Z4H3 204 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 AHI1Q8N157 1196 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 SMG8Q8ND04 991 aaKnown RBP12.51□□□□□ -0.41
DDX55-206ENST00000539934 TMIEQ8NEW7 156 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 ZNF461Q8TAF7 563 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 UBA3Q8TBC4 463 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 METTL6Q8TCB7 284 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
DDX55-206ENST00000539934 CPXM1Q96SM3 734 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 TRIM51Q9BSJ1 452 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 EBF3Q9H4W6 596 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 TJP2Q9UDY2 1190 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 EIF3LQ9Y262 564 aaKnown RBP12.51□□□□□ -0.41
DDX55-206ENST00000539934 CPQQ9Y646 472 aa12.51□□□□□ -0.41
DDX55-206ENST00000539934 DAPK3O43293 454 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 TMEM127O75204 238 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 HBQ1P09105 142 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 SRCP12931 536 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 KCNE1P15382 129 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 GDI1P31150 447 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 SERINC3Q13530 473 aa12.5□□□□□ -0.41
DDX55-206ENST00000539934 PIGHQ14442 188 aaPredicted RBP12.5□□□□□ -0.41
DDX55-206ENST00000539934 KCTD19Q17RG1 926 aaPredicted RBP12.5□□□□□ -0.41
DDX55-206ENST00000539934 PLEKHG4Q58EX7 1191 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms