RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 AGAP2Q99490 1192 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 GSDMCQ9BYG8 508 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 POLR1EQ9GZS1 481 aaKnown RBP14.83□□□□□ -0.04
USB1-203ENST00000539737 LZTFL1Q9NQ48 299 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 KCNK4Q9NYG8 393 aa14.83□□□□□ -0.04
USB1-203ENST00000539737 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
USB1-203ENST00000539737 UNC79Q9P2D8 2635 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 CLEC18AA5D8T8 446 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 NPIPB15A6NHN6 443 aaPredicted RBP14.82□□□□□ -0.04
USB1-203ENST00000539737 CYP2A6P11509 494 aaPredicted RBP14.82□□□□□ -0.04
USB1-203ENST00000539737 GP1BBP13224 206 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 F8A1P23610 371 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 CD82P27701 267 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 CSTF2P33240 577 aaKnown RBP eCLIP14.82□□□□□ -0.04
USB1-203ENST00000539737 CASRP41180 1078 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 MAPK9P45984 424 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 UQCRFS1P47985 274 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 CDC20Q12834 499 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 ILF3Q12906 894 aaKnown RBP eCLIP14.82□□□□□ -0.04
USB1-203ENST00000539737 SLC10A2Q12908 348 aaPredicted RBP14.82□□□□□ -0.04
USB1-203ENST00000539737 TRAF2Q12933 501 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 NR1D2Q14995 579 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 RAET1GQ6H3X3 334 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 CLEC18BQ6UXF7 455 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 BBS12Q6ZW61 710 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 TMEM135Q86UB9 458 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 BMPERQ8N8U9 685 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 CLEC18CQ8NCF0 446 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 AGBL5Q8NDL9 886 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 SLC37A2Q8TED4 501 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 P3H4Q92791 437 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 RTP4Q96DX8 246 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 ABHD17AQ96GS6 310 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 TEX101Q9BY14 249 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 ADNPQ9H2P0 1102 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 NT5MQ9NPB1 228 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 PILRAQ9UKJ1 303 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 PPP2R2CQ9Y2T4 447 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 PCDHGA3Q9Y5H0 932 aa14.82□□□□□ -0.04
USB1-203ENST00000539737 TNRC6AQ8NDV7 1962 aaKnown RBP14.82□□□□□ -0.04
USB1-203ENST00000539737 APOC4-APOC2K7ER74 178 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 HGSO14964 777 aaPredicted RBP14.81□□□□□ -0.04
USB1-203ENST00000539737 HEXIM1O94992 359 aaKnown RBP14.81□□□□□ -0.04
USB1-203ENST00000539737 SOD1P00441 154 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 CPP00450 1065 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 APOC2P02655 101 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 RNF224P0DH78 156 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 CES1P23141 567 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 IFI35P80217 286 aaPredicted RBP14.81□□□□□ -0.04
USB1-203ENST00000539737 ITKQ08881 620 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 AP1B1Q10567 949 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 NFATC2Q13469 925 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 CCDC181Q5TID7 509 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 ALG1LQ6GMV1 187 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 NPNTQ6UXI9 565 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.81□□□□□ -0.04
USB1-203ENST00000539737 OR4D9Q8NGE8 314 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 ALG3Q92685 438 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 SCAMP4Q969E2 229 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 DTD2Q96FN9 168 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 HES6Q96HZ4 224 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 OSBPL8Q9BZF1 889 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 GPN2Q9H9Y4 310 aaPredicted RBP14.81□□□□□ -0.04
USB1-203ENST00000539737 PHPT1Q9NRX4 125 aaPredicted RBP14.81□□□□□ -0.04
USB1-203ENST00000539737 RBM22Q9NW64 420 aaKnown RBP eCLIP14.81□□□□□ -0.04
USB1-203ENST00000539737 TP53TG5Q9Y2B4 290 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 TTLL3Q9Y4R7 772 aa14.81□□□□□ -0.04
USB1-203ENST00000539737 ZNF891A8MT65 544 aaPredicted RBP14.8□□□□□ -0.04
USB1-203ENST00000539737 INPP4BO15327 924 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 DDX3YO15523 660 aaKnown RBP14.8□□□□□ -0.04
USB1-203ENST00000539737 TJP3O95049 919 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 HOXC4P09017 264 aaPredicted RBP14.8□□□□□ -0.04
USB1-203ENST00000539737 FURINP09958 794 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 PECAM1P16284 738 aaPredicted RBP14.8□□□□□ -0.04
USB1-203ENST00000539737 ZNF28P17035 718 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 CA4P22748 312 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 VIPR1P32241 457 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 PRKD1Q15139 912 aaPredicted RBP14.8□□□□□ -0.04
USB1-203ENST00000539737 ARMC12Q5T9G4 340 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 USP45Q70EL2 814 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 TRIM58Q8NG06 486 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 TFB1MQ8WVM0 346 aaKnown RBP14.8□□□□□ -0.04
USB1-203ENST00000539737 PSMG3-AS1Q96PY0 264 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 DDA1Q9BW61 102 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 HEMGNQ9BXL5 484 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 NOD2Q9HC29 1040 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 PHTF1Q9UMS5 762 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 PACSIN2Q9UNF0 486 aaPredicted RBP14.8□□□□□ -0.04
USB1-203ENST00000539737 SLC17A4Q9Y2C5 497 aa14.8□□□□□ -0.04
USB1-203ENST00000539737 RP1L1Q8IWN7 2480 aaPredicted RBP14.8□□□□□ -0.04
USB1-203ENST00000539737 GOLGA6L9A6NEM1 432 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 PRR19A6NJB7 356 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 HACD1B0YJ81 288 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 KCNK1O00180 336 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 ZSCAN12O43309 604 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 ZNF189O75820 626 aaPredicted RBP14.79□□□□□ -0.04
USB1-203ENST00000539737 HLA-DQB2P05538 268 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 EPHB1P54762 984 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 PEX6Q13608 980 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 IHHQ14623 411 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms